Gene PHATRDRAFT_21868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21868 
Symbol 
ID7202713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011682 
Strand
Start bp622449 
End bp623429 
Gene Length981 bp 
Protein Length186 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002182104 
Protein GI219123587 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.213311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGAAAAACC TGTACCCTTC GAACTCTGCC ATCACATTGT ACACTTCGAC GTTACTATTC 
GTAATATGAC GGAGGAAATA AAGTCACACC AATCAGTCCG AGTCGCTATC CGCACAGGCT
CCGGAAGCCG ATCCCCAGGA ACTGCTTACG GTTTCCTCTT CCAGCTCCAT CACGACTTCC
GGCGCTGTGC CCACCAACAT TGACGCACAA TGCCAACGAG CTACAGGAGA AGTCTGCATC
TGCGATACCT GTGAAGTCAC CAGGACTCGC AAACACCTGC TCCGTAGCAA CAAGCGTACG
CGGGAAGAAG CCGTCACGGC CGCGGCTTTC GACAGCCACT CGCCGCCGAA GAAGTCCAAG
GCTCCCGAAA AGGCCGCTGC CTTGGATGTC AACAATAGCG GCGACGACAA GCTACAAACA
ATGTCCGCCG CCTGCAAAAC GATCCTGGAA TGCATAGGGG AAGACCCGCA CCGCGAAGGT
CTCCTGAAGA CTCCCCTACG ATGGGCCAAG GCTCTACTCT ACATGTGCCA AGGCTACGAC
AAACGCCCGG AAGACGTCAC CAACGGCGCA GTCTTTCACG AAAATCACTC CGAAATGGTA
GTGGTCCGCA ACATTGACAT TCATAGTTTG TGCGAACACC ACATGGTCCC TTTTACCGGT
CGCGTCCATA TTGGATACAT TCCCAACGGC AAGATTCTCG GTTTGTCCAA GCTCGCCCGG
ATTGCCGAAT TGTACGCCCG ACGCTTGCAG GTGCAGGAAC GATTGACACG CCAAATTGCC
GACGCTATTG TGGAAACGGT CGAACCCCTC GGTGTCGCCG TAGTCGTGGA GTGCACGCAC
TTTTGCATGG TCATGCGGGG AGTCCAAAAG ACGGGAGCTT TGACAACGAC GTCGTCGGTC
CGGGGATGCT TCGAAAGCAA TTCCAAGACA CGAGCCGAGT TCTTTTCCAT CATTCAAGGG
AATGGTGTTA CCATGTGTTG A
 
Protein sequence
MSAACKTILE CIGEDPHREG LLKTPLRWAK ALLYMCQGYD KRPEDVTNGA VFHENHSEMV 
VVRNIDIHSL CEHHMVPFTG RVHIGYIPNG KILGLSKLAR IAELYARRLQ VQERLTRQIA
DAIVETVEPL GVAVVVECTH FCMVMRGVQK TGALTTTSSV RGCFESNSKT RAEFFSIIQG
NGVTMC