Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21829 |
Symbol | |
ID | 7202859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011682 |
Strand | - |
Start bp | 480692 |
End bp | 481573 |
Gene Length | 882 bp |
Protein Length | 271 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002182074 |
Protein GI | 219123526 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0359223 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGGGTCCTCT GTTTGTCATC GGCCTTTGCG TTTCTCACTG TACAGCGGCC CACTGTCGTC TCTCGTATGT GCAGAGAATC CTTGGCTGCC ACTGATGCCG AAAATAATGG CACTTCAAAT ACAGTTGCTA TGGATGATGT GGGTTTTGTT TTGCTAGCCG GTGGTACGGG CTCGCGAATG AAAGCCACTA TGCCCAAACA GTTTCTGGAA CTCCGAGGTG TTCCTGTCTT GCATCATAGC CTCGACTTGT TCTTGGAGCG TCTACCGGAG CATTTGAAAG CCCAAAACAA AGCGCCGCCA CCGTACGTGG TACTAGTCAT GGACCCAATC TATCAAGAGG AGTATCAAGC TATAGTAAAT CGATACGATG GCCGTCTTGT GTTTGCCAAT CCCGGTGTCG AACGACAGGG ATCCGTAGAA AACGGACTCA ACAAATTGGT GGAGGTTTCC AATGGCAACT GTAAGTACAT AGCGATTCAT GACTCGGCTC GACCGCTAGT TACCATTCCA GAGCTGTGTA AGGTTGTCCA CGATGCCAAA GAGTACGGCG CAGCCGTCTT GGGAGTTCCG TGCAAAGCTA CGATTAAAGA AACGGAAGAC GGTTCTACGG TTCTGCGAAC ACTTCCACGA GCTCGCTTGT GGGAAGTGCA TACACCACAA GTCATTAAAA TCGAAACGCT GCAGCGCGGA TTTGTCAAAG TGGCGAGAGA AAATTTGGAA GTAACGGATG ACGTGAGCAT TGTGGAAGCT TTGGGAGAAC CGGTCAAATT AACGCTTGGC GAATATACCA ATCTAAAAAT CACCACGCCC GAAGATATGG ACGTTGCGGA AGCCATTTTG GAAGAAAGAA AGGACTCCCC CGTGAGCTTG ATAGTGGCTT AG
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Protein sequence | MCRESLAATD AENNGTSNTV AMDDVGFVLL AGGTGSRMKA TMPKQFLELR GVPVLHHSLD LFLERLPEHL KAQNKAPPPY VVLVMDPIYQ EEYQAIVNRY DGRLVFANPG VERQGSVENG LNKLVEVSNG NCKYIAIHDS ARPLVTIPEL CKVVHDAKEY GAAVLGVPCK ATIKETEDGS TVLRTLPRAR LWEVHTPQVI KIETLQRGFV KVARENLEVT DDVSIVEALG EPVKLTLGEY TNLKITTPED MDVAEAILEE RKDSPVSLIV A
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