Gene PHATRDRAFT_47510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47510 
Symbol 
ID7202612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp851833 
End bp853186 
Gene Length1354 bp 
Protein Length381 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181817 
Protein GI219122989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGATTGATTG CCTGATTGTG TTAGTGATGA CAACATTGCG AGAGACTCGC AGCATTCCCT 
TCCTCTCCTA TTGTGTCACA CTGCGTTTGA TCTCAGAGGA CAACTGTTGA ATCGAAACAC
CTACTTGCTT CGCTAGTTCG CCCGTATCTC TACTGTATCT CTACTTTACC GATATTAGAC
CCTCCACCCA AAAACGAGTA CGCGGACTAT GATCAGGAAT GGACTGATTT TGGCATTGGG
ATCATTTTGG CTATTATCTG ACGCCAACAC GCCATCGGAT GCCCTGCAGT TCGGTTTCAC
GACCAGCACC CAACGCGTCG GTCGTGTAAC AGCCGGTCCC ATAACCATTA GTGAGATAGG
GTGCGGGACG TGGAGTTGGG GAAACCGATT ACTCTTCAAC TACGACCCTT CTCAAGACGA
AGAAATATAC GAAGCCTATC GACTAGTTCG AGAAGCGGGT GTGACCGTTT TTGATACGGC
CGATAGCTAC GGAACTCTCG ATTTAAACGG ACGAGCAGAA ATGCTTCTCG GATCTTTCGA
AAGACGCTAC CAGCTAGAAC AGACGTCCGT CGCAAAACCC TGGTGGTCGG TGGCCAGTGC
ATCCGACGGG GTCCAAAATG CACAGCAAGT CGCCACCAAA TTTGCTCCCT ATCCTTGGAG
AATCACGCGT CAAAGTCTTT TGAATGCGGC GAATGCTTCA CTGGATCGGT TGCAGCAACC
TCAGTTGGCG ATTGCGCAAG CTCACTGGTC AACCGCCAAC TACCAACCTT TCCAGGAGGG
TGCCATATGG AACGGTCTAG CAGACATTTA CGATGCTGGT CTCAGTCAAG CGGTCGGGGT
CAGTAATTAC GGACCCAATC AATTACGGAA GGTAGCTTCG TTCATGAAGG GGCGGAACGT
TCCCTTGGCG ACCGCTCAGA TACAATATTC CTTGATGACC TACGGGGTGG CCCAACAGAT
GAATGCGGCA TGTGACGACG TTGGTTGTCG TCTTATCTCC TATTCGCCCC TCTGTTTGGG
ATTACTGACG GGAAAGTATG ATCTGGACAA TCTTCCGCGC CCGGGAAATC CGAGACGACA
ATTGTTTCGC GAACTTCTTC CTGGTGCACG GGGCCTCTTG AATACACTTC AGGTCATCTC
GAAAGATTAT AACAAGAGCC AGTCGCAAGT AGCTATAAAT TGGGCAGTAT GCAAAGGTAC
TGTTCCAATA CCGGGATGTC GGACAGTGGA TCAAGCTCGT GAAAATATTG CAGTCACCCA
ATGGAGACTC AAGCCTGACG CAATCGAAGA ATTGGATCAA GCAGCATCGT CGGTTCAGAA
ACCGATGATT CAGAATATTT TTCAGACAGA TTAA
 
Protein sequence
MIRNGLILAL GSFWLLSDAN TPSDALQFGF TTSTQRVGRV TAGPITISEI GCGTWSWGNR 
LLFNYDPSQD EEIYEAYRLV REAGVTVFDT ADSYGTLDLN GRAEMLLGSF ERRYQLEQTS
VAKPWWSVAS ASDGVQNAQQ VATKFAPYPW RITRQSLLNA ANASLDRLQQ PQLAIAQAHW
STANYQPFQE GAIWNGLADI YDAGLSQAVG VSNYGPNQLR KVASFMKGRN VPLATAQIQY
SLMTYGVAQQ MNAACDDVGC RLISYSPLCL GLLTGKYDLD NLPRPGNPRR QLFRELLPGA
RGLLNTLQVI SKDYNKSQSQ VAINWAVCKG TVPIPGCRTV DQARENIAVT QWRLKPDAIE
ELDQAASSVQ KPMIQNIFQT D