Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47448 |
Symbol | |
ID | 7202470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 645816 |
End bp | 647984 |
Gene Length | 2169 bp |
Protein Length | 692 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181774 |
Protein GI | 219122899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.445648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTTGTCTGA CCACCTCTTC TGTCAATGTG ATATGTAATT TTCAATTTGT TGTCGCCCCA GAAACAGCCT TCGTTCGGAT CTAGCACGCA ATGGCCGAAC CGCAACTCTT TCTGGCTTCT CTGGTATGCA TGTACCTCGT TCTGCGCGTT CAAGGCTTCT TCATTCGGCC CTCCTCTCCA CCTTCGTTTC CTACAACAAT CTTCAGCCGC TCTTTCTCTC GCAATCTTTC ACTCTACGCC AACTCCGAAA AAATCAACGG GGAAGATCCT AAGTCTCGTG GTGACAGCAA GAAGAAAACG AGCAAAGAAC CCAAGACGGG TTGGACGCAC AGTACGCCGG ATCCCACCTC TGACTTTTGG GAGCCTGGTC CTGAAAGGCC AAAACCCGAC GAAGAGCCGA AAAAGCTACG GACGGGGTGG CTGCACAACG CCGAGTCAAA AGAAAAGAAG TCTCTCTCTG TTACGGACGC TTCCGGGCTT CCGAATTCGG GAAAAACTGG TGGATTTTCC GAAGCCCAAC GCCGGTTGCA ACTCGCCATG AGACAACAGG AACGCAATCA TCGCATCATC GCGCCGCCGA CCCTACACGC GTGTGGTACA GATTTTCCCA TTGTGATCAC TGAACACAAA ATTTCGCTAC CTCTCAGTCG AGTAGAACCG CCTTCCCGTT TGGACGTCTA TTTCACTATT GTTGAAAAGG TACGGTCGGA AAAGGATAGA AAGTGGTTTG CTGGTCTCGC ATCCCGATCC CCCCAGCAAC GCGCGGGTGA TTACGTAGCG TTTGCTAACA TGGAAACGGC AACCGACATG ATCCTCTACT TACAAGGAGG TCCTGGTTTT GGAGCGCCAG TACCTGTTGC AAGTCTTGGT CTCGAGAAGG ACAGCAGCTG GGCGGCAAAG GCCTTGGAAA TGTACACACG TGTTGTCCTC ATGGACCAAC GAGGAACGGG TCAGTCCACG CCAATCACAA AACAGACTCT TGAAATAAAA TTCCCAAATC TTTTTTTGCT CGATTCAAAA GAAACTGTTA ATCTCACTCT CAACGAGCTG GAAGGAGAAG ATGCTGCTTT GGTAAAGCAA GCAGTTTTGG AGGCCACCTC TTACTTGTCT CATTTTCGAG CCGACAATAT CGTTCAAGAT GCGGAGGAAA TTCGAGATGC GCTCTTGACT CCGATAGAAA CCGATAACAT AGCTCGACCG TGGGGTTGCT CGCTGGGACA ATCGTTTGGC GGGTTTTGTT TAATGACCTA CTTATCTCAG GTTGCGCACC CTCCGCAACT GTGCCTTTTC ACTGGAGGAA TAGCGCCGAT ACTGACGCAG ACCTACGATG TGTACGCATC GTTGTGGGAG CGTGCGAAAG AGCGCAGCTT GCTGTACTAT GATATGTACC CCAGTGATAT TGTTCAGGTC AAGAAAATTG TCTCGAGGCT ACTGGTTGAA CCGGTTTCTT TGCCATCCGG CGGCAAGCTA ACTGCGCGCA GGTTTCTACA GCTTGGGTTG GCACTGGGGG GATCGCCTAC CAGCTTTGCT CGTCTACATG CTCTCATTAA CTCGGCATTC GTTGAAGGTA CAGATGAAAG TGCGCTAAAA TTTCGTCGGA CGTTTCTTAA AGAGATTGAC TCTGAACAGA ACTTCGATGA TGCACCAATC TACTTTTGGC TGCACGAGAG CATATATGCC AATGGTAAGA ATAACTCGCC AACACATTGG ACGGCTCACC GTGCTTACGA GGACAAGGTG AAGAGTCAAC CTGATTTCGA TTTCGTACAG ACTAGCACCA TACTTTCAAC CGACCAGCCG ACGCTTTTCT TTTCCGAAAT GGTATTTCCT TGGATGGCAG AAGACTACGC AGAACTGAAG GGAGTGGGTC TAAATGCCAT GGCAAATGAT TTGGCGGCGA AAGAGGATTG GGGAAAATTA GTTGAGGAAG ATCAAATGCG AGAGGTCCTC AGCGACGGTC GATCTACAGC TGCTGCAGCA GTCTACTACG ATGATCTCTA TGTCGATTTT GATAGTTGCA TGAAGGTGAC GGCACACGGT GGACCTCTGG AAGCTTGCAA GGTTTGGATT ACCAACGATT ATCAGCACTC GGGACTACGA GACGACGGAG CGCTCATCTT TGCAAAACTT CACGGAATGG CAAATGGGTG TATCCGCACG CCGAGCTAA
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Protein sequence | MAEPQLFLAS LVCMYLVLRV QGFFIRPSSP PSFPTTIFSR SFSRNLSLYA NSEKINGEDP KSRGDSKKKT SKEPKTGWTH STPDPTSDFW EPGPERPKPD EEPKKLRTGW LHNAESKEKK SLSVTDASGL PNSGKTGGFS EAQRRLQLAM RQQERNHRII APPTLHACGT DFPIVITEHK ISLPLSRVEP PSRLDVYFTI VEKVRSEKDR KWFAGLASRS PQQRAGDYVA FANMETATDM ILYLQGGPGF GAPVPVASLG LEKDSSWAAK ALEMYTRVVL MDQRGTGQST PITKQTLEIK FPNLFLLDSK ETVNLTLNEL EGEDAALVKQ AVLEATSYLS HFRADNIVQD AEEIRDALLT PIETDNIARP WGCSLGQSFG GFCLMTYLSQ VAHPPQLCLF TGGIAPILTQ TYDVYASLWE RAKERSLLYY DMYPSDIVQV KKIVSRLLVE PVSLPSGGKL TARRFLQLGL ALGGSPTSFA RLHALINSAF VEGTDESALK FRRTFLKEID SEQNFDDAPI YFWLHESIYA NGKNNSPTHW TAHRAYEDKV KSQPDFDFVQ TSTILSTDQP TLFFSEMVFP WMAEDYAELK GVGLNAMAND LAAKEDWGKL VEEDQMREVL SDGRSTAAAA VYYDDLYVDF DSCMKVTAHG GPLEACKVWI TNDYQHSGLR DDGALIFAKL HGMANGCIRT PS
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