| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47417 |
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| Symbol | |
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| ID | 7202552 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 576027 |
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| End bp | 579128 |
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| Gene Length | 3102 bp |
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| Protein Length | 1009 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181586 |
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| Protein GI | 219122509 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.143888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATG GGGAAAAGAA GTCGACGACC TGGCAAACCC TCGCTTGGTG CACTCGCAAT
TCTTTTCATA TGAGATTGAA GAGAGACAAG AAATTGATCT GTCGAATGCG GCAAAACAAC
GTCCCAACGG TTTTAAATGT CGCCGAAAAG CCATCCGTGG CCCGGGCTTT GGCTTCTGTC
TTTGCCCGAT TACCCAACGC CGTTGATCGT GGAATGCGTC GAGAGGGTAA TCAAGTGTTC
AGCCACGAAA ATGTCTGTTT TCCTAGCGTG TTTTCTCAAG GAAATGGTGT ATGCGTTCAA
GGACCTAGTA CGTCGCAACG AGCTGCTTTG TAGTACGTCA AGCCGCTTTC ATTTTGCCTC
TCACAAACTG GTTACGCGAT ATGCTAAGTA GTAGTCCCAC ACAGTATGAT AACAACATCC
GTAAGGGGTC ATTTAGCGTC CCAAGACTTT CCTCCGGCGT ACGGATGGTC CAAGTGCGAC
CCAATTGCCT TGTTTGAAGC TCCGATTGAA ACGTCGTATC GCGACGACAT GCAGCCCCTT
GAACGCATGT TGAAGTCATT GTCACGTCAA GCCCAGGTCC TAATTCTCTG GTTAGATTGC
GATCGGGAAG GAGAAGCCAT TGGCGATGAA GTACGTACCG TGTGCTTGGG GTCAAATTCA
AGGCTGCAGG TGTACCGGGC ACGGTTTTCG ACCGTGTTGC CAGTTGAAAT TGAGAGAGCC
CTACAAACAC TAGGTCGAGT GAACGAGTAC ATGGTGGCAG CGGTCCAAGC CCGATCTACG
CTAGATCTAC GAGTAGGTGC CGCCTTTACA CGATTTCAAA CCCTACGATT GCAACGCAAA
TTTGACGGCT TTGCTGAGCA GGGTGTCATC TCCTACGGCC CATGCCAGTT TCCGACTTTG
GGATTTGTTG TGGAGCGATG GGCACGGATT GAGACGTTCA TCCCAGAGGA CTTTTGGCAT
TTAGAGCTAG CGATTTCTGT GGATGACACT TACCACCAGC AATCGCAAGA AGAAGACCAA
AGTGCTGCTC GTGGACGTAC CCAACAAAAT CGGACAATTC ACTTTTCGTG GAAACGCGGA
TACTTGTACG ATAAACTTCT GACCACCGTG CTATTCGAAG AGTGTTTGGA AGCTGGAGAA
GCGGTCGTTA CCGCAATGAA TGGGCGCACT AGGAATAAGT GGCGCCCCGT CCCACTAGCA
ACGGTCGAAC TACAAAAGCG GGCTTCAATG TACTTGCGAA TTGGATCCGA AACCTTGATG
TCGGCCGCAG AAGAATTATA TCAACAAGGT TATATATCCT ACCCCCGTAC CGAAACAGAA
CGTTTCAGAC CAGAGTTTGA GCACCGCCCA TTAATACAGC AATTTTCCTC ACTTCAAGGG
GAGTTCGGGG CCTATGCTTC CAAGTTGCTG AATGAAAATG GGTTTCAAAT TCCTCGTGCG
GGGAAAAGCG ATGATCAGGC CCATCCTCCC ATCACGCCTG CCAAAGCCGT TGATCCAAAT
ACTATTCAGG ACCAGATACA GCGAAAAATA TATTCTTTGA TTGTAAAGCA CTACTTGGCC
TGCTGCTCTC GTGATGCTGT TGGGAGAGGA ACAACGTTGA CAGTCCGAAT GGGCACCGAA
GAGTTCAATG CAACTGGTTT GATGGTTATC GAGAAGAATT GGTTAGAAAT ATATTCCCCC
TGGGAACGTT GGGGCTCAGG GCAGGGAGAA TTACCTCCGC TCCAAGTCGG TAGTCGCATA
AGGCCGACAT CGTTCCTGAT GAAGGAGGGT CGCTCAGGCC CTCCACAACC CATTTCAGAG
GTGGAGCTTA TTTCGCTCAT GGATCGCAAT GGTATTGGAA CTGATGCCAC GATTGCGCAA
CACATATCCA CCATTCTCGA TCGCGAGTAT GCTAGAAAGG ACGGCAGGCA AAAATTTCTA
CCAACACCTC TGGGAATCGC ACTCGTGGAA GGCTACAATT CCATGGGATA TCAACTGAAC
AAGCCCGACT TGCGCCGTGA GATGGAGGCC GAATGCAACG AAGTCGCTTC TGGACGTAAA
ACTAAGGAAG AAATTATGGT GCCCATTCTT GCGAAAATGA AAAGCTGCTA CGAAACGGCA
AGAGCTGAAG CTCGCAAGCT GGACGAAGCT GTTGCACGAC ATTTTCCTCG ACTCGGTGCC
GGTGAGAGCA CATCTCAAGT TGTGGAAGAG AGTTTCAGCG AATGCGGAGT CTGTCGCAAC
AGCATGGCGT TGAAGCAAGA ACGAGAAAAT AACAACCGTA CAACAGCTCG CAACACTGTG
CGGCGCAAAC TGTTGTACTG CAGCACATGC CGGGCAGGCT GGACTTTACC ACGGGGTGTA
GTCCGACCAA AAACAGAACA AGAGGACAAT GGTCCTCCTG TCAAATGCCC CATATGTCAA
TTTCAGGTGA TTCGGATATT GCGAGGGGAG GGCTATGAAG GCAACGGTTA TCACGTTTGC
CCCAAGTGCT TTTCGGATCC ACCTTCCGAT CACGGTGGTG CCAGCAACGC TGGCGACTTC
CGCTGCTTTG CTTGTCAACA TCCAACCTGT GCTCTCGCCA GCGGAACACC GGGAGGTGAC
GTTGAAGTCT TTCGATGCCC CTTTTGCCAT CCATCGGCAC AACCAACTTC GACCTCTGAT
TCCGGGAAAG TATGCGTACG CAAAACATCA CGCGGATACG TACTTTCTTG CAACAAGTAT
GTACGAGGTC AGGACCGATG CTCGTATACA ATCTGGCTCC CCAAGGAATG CCACAAAGTC
TCTGTGCTCT CGGGCGATGA AAACCAAAAC GAGATCTGTG GTCGATGTTC CTCGCCGCGT
GCTGTCATTC GCAAGGTCCA TTTCGTCTGG AAACCCGGTA GCGTTCCGCC GCACTTGGGG
CGTGAATGCA CCGTGTGCGT GCTATGCGAT GCCGATTTTC GTCGTGAACT CAATATTTCG
TTGCCACAGA TGAACCAAGT ACAAAGTCGA CCCCGCACGA CAGCCGGTCG GGCAGGGCAT
CGCGGTGGAG GTGGAACAGA GACAGGGCAG GGAGGTGCAG GAAACACTTG TTTCCACTGC
GGCCAGCCCG GTCATTTTGC CAACAGCTGT CCAAATAGAT AG
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| Protein sequence | MDNGEKKSTT WQTLAWCTRN SFHMRLKRDK KLICRMRQNN VPTVLNVAEK PSVARALASV
FARLPNAVDR GMRREGNQVF SHENVCFPSV FSQGNGVCVQ GPSTSQRAAL YMITTSVRGH
LASQDFPPAY GWSKCDPIAL FEAPIETSYR DDMQPLERML KSLSRQAQVL ILWLDCDREG
EAIGDEVRTV CLGSNSRLQV YRARFSTVLP VEIERALQTL GRVNEYMVAA VQARSTLDLR
VGAAFTRFQT LRLQRKFDGF AEQGVISYGP CQFPTLGFVV ERWARIETFI PEDFWHLELA
ISVDDTYHQQ SQEEDQSAAR GRTQQNRTIH FSWKRGYLYD KLLTTVLFEE CLEAGEAVVT
AMNGRTRNKW RPVPLATVEL QKRASMYLRI GSETLMSAAE ELYQQGYISY PRTETERFRP
EFEHRPLIQQ FSSLQGEFGA YASKLLNENG FQIPRAGKSD DQAHPPITPA KAVDPNTIQD
QIQRKIYSLI VKHYLACCSR DAVGRGTTLT VRMGTEEFNA TGLMVIEKNW LEIYSPWERW
GSGQGELPPL QVGSRIRPTS FLMKEGRSGP PQPISEVELI SLMDRNGIGT DATIAQHIST
ILDREYARKD GRQKFLPTPL GIALVEGYNS MGYQLNKPDL RREMEAECNE VASGRKTKEE
IMVPILAKMK SCYETARAEA RKLDEAVARH FPRLGAGEST SQVVEESFSE CGVCRNSMAL
KQERENNNRT TARNTVRRKL LYCSTCRAGW TLPRGVVRPK TEQEDNGPPV KCPICQFQVI
RILRGEGYEG NGYHVCPKCF SDPPSDHGGA SNAGDFRCFA CQHPTCALAS GTPGGDVEVF
RCPFCHPSAQ PTSTSDSGKV CVRKTSRGYV LSCNKYVRGQ DRCSYTIWLP KECHKVSVLS
GDENQNEICG RCSSPRAVIR KVHFVWKPGS VPPHLGRECT VCVLCDADFR RELNISLPQM
NQVQSRPRTT AGRAGHRGGG GTETGQGGAG NTCFHCGQPG HFANSCPNR
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