| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47357 |
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| Symbol | |
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| ID | 7202409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011681 |
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| Strand | + |
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| Start bp | 380675 |
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| End bp | 382197 |
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| Gene Length | 1523 bp |
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| Protein Length | 495 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181544 |
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| Protein GI | 219122422 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.22131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTACCCCATG ACTGCTTTGT TTCCAGCGCT GAACAATGGC AGCGAATGTT GGTGGCAGTT
TAGCTGAAAC CACTTCATAC GTACGGCGCG AGCCAGTCCT TCTGGTACCG CCACAACTTG
CCAAGTCTTC CTACGCGGTT TTGATTCGGT GCCGCTGTGT AGCTCGGCTC TGGCATCTGG
CAGGACGGCA TGGCTCACGC ACTCATCGCT ATGGAGATTT TATAGCGATT CCCATTCTTT
CAGAAGAAGT TGTGTCGAAA GCTTCGTTGT TGGACCGAGA ACTGTGCTCT CTTCTACGAA
CGCAAGGCGT TTCCATTGTG GAGAAAGATT TTCAGCCATC AAATCGCATT CACATCCCAC
CCCCTTTTGA CGCGCGGATT CATCCGGAGA GAGCTCCGCC AGCACGTGTC GGAACGGGTG
CGGAGATCAC ACAAGTTCCC AGTCGACGGG CAGCTTTCTC GTACGCGGAA TTGTTTGCTG
GTATTGGCGG CTTTGGCGTA GCGTTGGAAT CCCTCGGTGG TGAGTGTGTA TTCTGCTCAG
AAATTGACGA AGTCTGCCGA ACAGTTTACG CGTTAAATTT TTCGACAAAG AACCAACATG
GAGATATTTA TGAGGTTCGG GATAGAGACT TTCCCTCGCA GCTGGACTTA TTAGTAGGAG
GTTTTCCGTG CCAGCCCTTT TCGTCGCTTA GTGAACAGCC AGGTCTACAT TGCCCAAAAG
GCAATTTGTT CTTACAGATT GTGCGCGTTC TCAAATTATC AAAACCGAAA GCCTTCCTAT
TGGAAAACGT TCCGGGCCTC GTCCGCATGA AAGATAGTTT GAATGTAATT GCGAATGCTC
TTAGCGACGC CGGCTATGAC GTGACTACGG AAGTTTGTGA CGCCCGTGGT CTTGTTGCCA
CTTCTCGGAA ACGTCTCTTT TTTGTGGGCT TGAGAAGGCA ACAAGGTATA GAAAATGCTC
CTTTTGAGTT CCCTTTCATC CCCGACCTTG GTTTTCGCGG AGTGGATGTA CTAGAATACT
GCGATATTAC CAACGATACC ATTCTACGCA TAAACGATGA TCAAATGGAC CGATTAAGCC
GTGAAAAGTA CTGGAAGCCC GCTCACTTGG CGTGGCCAAA TACTGTCTGT CAAACATTGG
TTTCGCACTA TGGAAATTCT GTATCTCGGG GAAAATCCCA ACTTGTCCCG TGCGCTACTG
GAAATCCACG CCGCTTTTCT GCTCGCGAAT GTGCCCGCAT AATGGGGTTT CCGGATCGAT
TTATCTTGCC TAAACGAAGA GAGAACCAAG GAGAAATGGC CCATCTGAAA GAACAGTACA
GGATGTTTGG CAATGCTGTA TGTCCCCCTT TGATCGCAGC AATAGCTGGT GCCGTCCTAG
CACGGTGCAA TAAAATGACT GGGTATTCTG ACCACTCCTG TTGGGTCGAC AGGGGTAGGT
TTGCTGCAGT AAAATTGGCC AATGAAGCTA CTTTAAGACA GGATGGAATC ACTGAGGAAA
GCAGTGAGGC CGACCGTTTA TAG
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| Protein sequence | MAANVGGSLA ETTSYVRREP VLLVPPQLAK SSYAVLIRCR CVARLWHLAG RHGSRTHRYG
DFIAIPILSE EVVSKASLLD RELCSLLRTQ GVSIVEKDFQ PSNRIHIPPP FDARIHPERA
PPARVGTGAE ITQVPSRRAA FSYAELFAGI GGFGVALESL GGECVFCSEI DEVCRTVYAL
NFSTKNQHGD IYEVRDRDFP SQLDLLVGGF PCQPFSSLSE QPGLHCPKGN LFLQIVRVLK
LSKPKAFLLE NVPGLVRMKD SLNVIANALS DAGYDVTTEV CDARGLVATS RKRLFFVGLR
RQQGIENAPF EFPFIPDLGF RGVDVLEYCD ITNDTILRIN DDQMDRLSRE KYWKPAHLAW
PNTVCQTLVS HYGNSVSRGK SQLVPCATGN PRRFSARECA RIMGFPDRFI LPKRRENQGE
MAHLKEQYRM FGNAVCPPLI AAIAGAVLAR CNKMTGYSDH SCWVDRGRFA AVKLANEATL
RQDGITEESS EADRL
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