Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37460 |
Symbol | |
ID | 7202324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 196136 |
End bp | 196771 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181677 |
Protein GI | 219122697 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAATT CTGTAGCTCG GAATAAGCTG AGAATTGTCG CTGCCGGGAG AGGCCGGTCC ATGTGCCTAG ATCCTATCGT AAAGGCTGTG TTGGATCTGA CGGATTCCAT AGAAGAAAAG GAGATCCGAC TCGTGTACCT TGGAACGGCA ACCTACGACA AGAACGATGC ATTCGAGGCC CAAACACATG CGTACTCTAG ACTATCAAAC TGTAAAGTTA TCAAGCTTGA AGTTAGTGAA GCTGCTCAAA AGAATCTTTC CCATGATGAA ATCCGAGACG TTATTGATTC GGCTCATGTG ATTATGGTCA GTGGTGGCAA CACTTTGTAC GCCGTCAAGC GCTGGAAGCA ACTGAAGATC GACGCCATGA TTCGAAACTG TGTAATCCAA AAAAATCCCC CGCCTGTGTT ATGTGGGGGC AGTGCTGGAG CAATTTGTTG GTTCGAATAT GGTCACTCGG ACTCAATGGA CCCGACTACA TTTTTTTCGA GCCAATCCTC TGACGACTGT GCTGCTCTTG CGGGCTCTCT AGAGTTGAAG GCCTCGGGTA TCTCCCTGCG TTATGCGTAC CACATCACGA CGCTACCCAG AGCAATGGTC TCCCGCGATC ACAAGATTCA GATGCCATGC TATTGA
|
Protein sequence | MMNSVARNKL RIVAAGRGRS MCLDPIVKAV LDLTDSIEEK EIRLVYLGTA TYDKNDAFEA QTHAYSRLSN CKVIKLEVSE AAQKNLSHDE IRDVIDSAHV IMVSGGNTLY AVKRWKQLKI DAMIRNCVIQ KNPPPVLCGG SAGAICWFEY GHSDSMDPTT FFSSQSSDDC AALAGSLELK ASGISLRYAY HITTLPRAMV SRDHKIQMPC Y
|
| |