Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37456 |
Symbol | |
ID | 7202323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | + |
Start bp | 186358 |
End bp | 187380 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181502 |
Protein GI | 219122335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAATT TAAGATGTGC ACGTCCTTTG GCTATCCTAA GTCTCGTTAC TTTACGTCAA TTGGCCTTCG CACGAAGCTG GCTCGATGTG GCCGACGTTG CACTCTTCGC CGTATCACCG ATGGATCCGA ATCGTCTCCT TTACAGTGGT GAAAGTGATC CGTTCCTTTT TCCAACGCCA AACCCAACTA CGTCACCGTT TTCAGGGCCG ATCGCAACTC CTACCTCCCG TCCAGTAGCT AATGTTGTTG CCGCACCCAG CACATCGGAA CAGAGGTCGA ACGCACCGTC TGCGCGTTGG GAAAATCGGG ATGGAAATGG TGGTTGCCAA CCTGGACGAG TACTTCACGA AGTCGTATTA CAGGACTTCG GGGGTGACGA ACAATACAAC AACAGCATAG CTTTTTGGAC TATGCCTGAT ATTTTACCGG ACGAAAGATC CGAAACCAGC TCAACTGCGC ATATTTCCGG TCCGAACCCC ACTTCAGATG GCTTGGACAG CGCTTCTGAA GGAGGAATCG AATTATTCAA AGGCAGTTGG AAGGCTGGCG AAGACTCTTT CTCTTACATT TGCCTGCAGC CTGCTAAGTG CTACCAAATG GAAGTTGAAG GCGGACTCGG GTCAAGTGAT GCTACATGGG AAGTAAGAAA AGTAGAGATG GATATAAACG AGAACATGGG TGCAGTAGTG GCAAAAGGCT TCGTACCAGA AAAGTGCGAA TTCTCAATAT TGAATGAAGA GACCGACGCG CTAGCCTGTC CTCTCCGTTG CAACGTCTCT CCCGAAACGC CGGCAGCTTC TTTCTCTTCG GCCCCAGCCT CTGCACTACC CACGGCGCTT TTAAGTGATG CGACAGAGAA GCCGAATCTA TTGCGTTCGA CAGCACCTAG CGATGGTCCG TCACTTATCC CAAGCGACGT CCCGTCATAT GTACCCAGCT ATGCACCATC CATCGTCCCC AGTGAAATTC CTTCGTCGAA TGTACAAAGT GGCTTTGGAA CAGATCAACG TATTATTGAT TAA
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Protein sequence | MLNLRCARPL AILSLVTLRQ LAFARSWLDV ADVALFAVSP MDPNRLLYSG ESDPFLFPTP NPTTSPFSGP IATPTSRPVA NVVAAPSTSE QRSNAPSARW ENRDGNGGCQ PGRVLHEVVL QDFGGDEQYN NSIAFWTMPD ILPDERSETS STAHISGPNP TSDGLDSASE GGIELFKGSW KAGEDSFSYI CLQPAKCYQM EVEGGLGSSD ATWEVRKVEM DINENMGAVV AKGFVPEKCE FSILNEETDA LACPLRCNVS PETPAASFSS APASALPTAL LSDATEKPNL LRSTAPSDGP SLIPSDVPSY VPSYAPSIVP SEIPSSNVQS GFGTDQRIID
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