Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37452 |
Symbol | |
ID | 7202367 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 177746 |
End bp | 179253 |
Gene Length | 1508 bp |
Protein Length | 363 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181673 |
Protein GI | 219122689 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGACCC AAAAGGAAAC AACACCGTGC GGTAGGGTCC GCAATCCCGT AGAATTGGTA CCCAGTGGTA CGTGAACGAC ACAACGTTCC ACGACTTGGG TGGCCGTCAC CGCCGTTGGT CGTGTGTCCC GCGGGAGGTG TTTGGGGGAG TCTCACAGTC AGTCATTGCA ACGTCACGTC ACCGCAAACC CGGATATTTA CAGTAGGACC CCCCTACCCG CCCCTGGGAC GGCACGCGTT GGATCCGAAA TTCGAACCCG TGGTACGCGG TTCCAACACG CACCACCCGT CGGGCGGAAC AAGCAAGCGA GCACGCCACG CCCTGCTTTG GTTTGAATCC AAGACACCGT CGGTACGGTA GGGTAGAGCT TGTCCTTCGT TTCCACACCG AGTGGGTCGG CGGGACACAG CCCAGCTCCC TTGGTCTGGC ACCCGTGTCA CTCTCACTGG TAACGCACTC ACTCGTTCAC TCGTTCAACT TGCTCTGTTT CGTGACTTCC AGGACTCACT TATGTTTCCC CATGGCACCC ACCGTCCGGC GAGGTTGATT CCACTCACAA CGGTGTGGGG GCATCCAAAC ATCCATTCGT CTCATACGAC CACTCAAAAC CATTCAAACC TTTTGGTGGT AGACAGGCAC CAACCGTATG GGATTTCGTT CCCGATCGTT TGGAGGAGGC AAGGGTCTTT GGATCCGTCC ACGCCGGCAC CGCATTGGTC CACCACCGCC CCACGACACC CAAACCTCCA AACCTCATCC CACCGTGGGC TGGGATGACT TTCGTGGTCG TCCCGTCTAC CCTTCCTCCA CTACAGTGTC GTCGTCGTCA TCGTCAGTAG TGACCGATAC TACCCGTCGA GACAGTTCCG ATCCCGTACG GTTGCCCGTC ACGACGAGCC GACGACGACG TTCCCGGTCC GCCTACGGCA ATCGCTCGAC TTGTGGTGGT GGTGGGGGAC ACGAAGATAC GTCGCCTCCA CCGAAACGTG TCCGTCGTGA CTCGCAGTCG ACGTCGACTC TCGGCACTAG TCCAGTGGAA ACCACCAACA CCCAACGAGC ACCCCACACC ACTGCGGCCG TCGGTGCGCG GCCTCTTGCC GACGTTGCAA AGGTGAGGGG TAGGTTGATT GCTACTACAA AAACTACGAC TGCTACTACA AAAACTGCTA CGGGCGGCTT ACCAAACACC CCCGGACCGC GTGCAACCGT CCAACAGACG TCGTCCACGA CGTTGTTGGA ACACGCCGCC CAACACTTTC GTACACTCGA CGCCTCCCGT CTTTTACTGC GGAACGCCGC GTGGCAGACT CCGCCGCGTG GAGTCATTCA ACGAACGCGT CGTCGTCTCG ACGGGAACGA TCCCGTGTTA CAACGAGAGT ACCAACACTA CGTGCAGACT TGTGCCGATT GCTGGACGCC TTTGTCGTTG CCTCTGTTTC TCCAACACCG CCACGACTTT ATGCGACCCC GATCGGCACT CTTTCACGCC TTTCTGGACG AGTACTAA
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Protein sequence | METQKETTPC GRVRNPVELV PSVGPPYPPL GRHALDPKFE PVVRGSNTHH PSGGTSKRAR HALLWFESKT PSTGTNRMGF RSRSFGGGKG LWIRPRRHRI GPPPPHDTQT SKPHPTVGWD DFRGRPVYPS STTVSSSSSS VVTDTTRRDS SDPVRLPVTT SRRRRSRSAY GNRSTCGGGG GHEDTSPPPK RVRRDSQSTS TLGTSPVETT NTQRAPHTTA AVGARPLADV AKVRGRLIAT TKTTTATTKT ATGGLPNTPG PRATVQQTSS TTLLEHAAQH FRTLDASRLL LRNAAWQTPP RGVIQRTRRR LDGNDPVLQR EYQHYVQTCA DCWTPLSLPL FLQHRHDFMR PRSALFHAFL DEY
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