Gene PHATRDRAFT_37452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37452 
Symbol 
ID7202367 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp177746 
End bp179253 
Gene Length1508 bp 
Protein Length363 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181673 
Protein GI219122689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACCC AAAAGGAAAC AACACCGTGC GGTAGGGTCC GCAATCCCGT AGAATTGGTA 
CCCAGTGGTA CGTGAACGAC ACAACGTTCC ACGACTTGGG TGGCCGTCAC CGCCGTTGGT
CGTGTGTCCC GCGGGAGGTG TTTGGGGGAG TCTCACAGTC AGTCATTGCA ACGTCACGTC
ACCGCAAACC CGGATATTTA CAGTAGGACC CCCCTACCCG CCCCTGGGAC GGCACGCGTT
GGATCCGAAA TTCGAACCCG TGGTACGCGG TTCCAACACG CACCACCCGT CGGGCGGAAC
AAGCAAGCGA GCACGCCACG CCCTGCTTTG GTTTGAATCC AAGACACCGT CGGTACGGTA
GGGTAGAGCT TGTCCTTCGT TTCCACACCG AGTGGGTCGG CGGGACACAG CCCAGCTCCC
TTGGTCTGGC ACCCGTGTCA CTCTCACTGG TAACGCACTC ACTCGTTCAC TCGTTCAACT
TGCTCTGTTT CGTGACTTCC AGGACTCACT TATGTTTCCC CATGGCACCC ACCGTCCGGC
GAGGTTGATT CCACTCACAA CGGTGTGGGG GCATCCAAAC ATCCATTCGT CTCATACGAC
CACTCAAAAC CATTCAAACC TTTTGGTGGT AGACAGGCAC CAACCGTATG GGATTTCGTT
CCCGATCGTT TGGAGGAGGC AAGGGTCTTT GGATCCGTCC ACGCCGGCAC CGCATTGGTC
CACCACCGCC CCACGACACC CAAACCTCCA AACCTCATCC CACCGTGGGC TGGGATGACT
TTCGTGGTCG TCCCGTCTAC CCTTCCTCCA CTACAGTGTC GTCGTCGTCA TCGTCAGTAG
TGACCGATAC TACCCGTCGA GACAGTTCCG ATCCCGTACG GTTGCCCGTC ACGACGAGCC
GACGACGACG TTCCCGGTCC GCCTACGGCA ATCGCTCGAC TTGTGGTGGT GGTGGGGGAC
ACGAAGATAC GTCGCCTCCA CCGAAACGTG TCCGTCGTGA CTCGCAGTCG ACGTCGACTC
TCGGCACTAG TCCAGTGGAA ACCACCAACA CCCAACGAGC ACCCCACACC ACTGCGGCCG
TCGGTGCGCG GCCTCTTGCC GACGTTGCAA AGGTGAGGGG TAGGTTGATT GCTACTACAA
AAACTACGAC TGCTACTACA AAAACTGCTA CGGGCGGCTT ACCAAACACC CCCGGACCGC
GTGCAACCGT CCAACAGACG TCGTCCACGA CGTTGTTGGA ACACGCCGCC CAACACTTTC
GTACACTCGA CGCCTCCCGT CTTTTACTGC GGAACGCCGC GTGGCAGACT CCGCCGCGTG
GAGTCATTCA ACGAACGCGT CGTCGTCTCG ACGGGAACGA TCCCGTGTTA CAACGAGAGT
ACCAACACTA CGTGCAGACT TGTGCCGATT GCTGGACGCC TTTGTCGTTG CCTCTGTTTC
TCCAACACCG CCACGACTTT ATGCGACCCC GATCGGCACT CTTTCACGCC TTTCTGGACG
AGTACTAA
 
Protein sequence
METQKETTPC GRVRNPVELV PSVGPPYPPL GRHALDPKFE PVVRGSNTHH PSGGTSKRAR 
HALLWFESKT PSTGTNRMGF RSRSFGGGKG LWIRPRRHRI GPPPPHDTQT SKPHPTVGWD
DFRGRPVYPS STTVSSSSSS VVTDTTRRDS SDPVRLPVTT SRRRRSRSAY GNRSTCGGGG
GHEDTSPPPK RVRRDSQSTS TLGTSPVETT NTQRAPHTTA AVGARPLADV AKVRGRLIAT
TKTTTATTKT ATGGLPNTPG PRATVQQTSS TTLLEHAAQH FRTLDASRLL LRNAAWQTPP
RGVIQRTRRR LDGNDPVLQR EYQHYVQTCA DCWTPLSLPL FLQHRHDFMR PRSALFHAFL
DEY