| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_37440 |
|---|
| Symbol | |
|---|
| ID | 7202359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | - |
|---|
| Start bp | 154002 |
|---|
| End bp | 155126 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181669 |
|---|
| Protein GI | 219122681 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATA AAGCCAAGGA ATGGTATCCA AAGATTGGAG GAACCTACAG GCTGATGGAT
GACGTACGTA CCGTCAGTGA AAACTTATAT TTACGACCAG TGTCACAAAT GCTAGAGAGC
TCTAGCTAGA GTAGACACAC AATTCTTATG TGACTTTATT AGTACCCTCG TGTCAAAACT
CATCCGCGTT TTTGTGGACC AAATACTTTT GTTGCTGCTG CCTATATTAC TTTTCCTCAA
CAGCGAGAGG TCTTGCTATA GCCATGAGGC CCGTTTTGAA GAAGCGAAAA TTCAAGGAGG
TCATCGATTT GTGTTCCGAG GACGAGAGCG TTGAGACCGG AAAGCGCTCG GCATGTTCGA
CCGTAAAGTC GGGGGTGCGC CCAACTGTTC CAATCGACGA CGGTGACTTG ATCGAGATGT
CTTACAAAAA GGATAGAATA AATCACAGAC CGCTTGTCTA TATCGATACA GAAGGGGGGG
ATGACAGTAT CGTGTCAGAA GACTGCTACT ATCCGTTGAT GGAATGGAAT AAGGGGGCGG
CACGGACCTG CGCCGGCGGC GATGAAACCA TCAAACGACC CAGCTTTTAT CTCCTTCATA
TCCAACAACG CGACAAATGG AGCTGTGGCT TTCGCAATTT ACAAATGTTG CTAGTTACTT
TGGTTCCCTC TCTACCACCC GAGCATATTT ATTTTGATAA TGGCAGCTTG AATGGACAAG
CTTTTCGGGT GCCTTCTTTG CAACAGCTCC AAGCTTCTTT GGAACGGTCG TGGCGTGCCG
GATATGATCC CGATGGTGCA CAGCACTACC AGAATCGTAT TTTGGGTAAA AACTCGAAAA
TTGGAGCAGT CGAAGTTTCG ACAACCTTGT AAGTTTGCTG ATCGAGTGGC CGAGGCTACG
ACTACAATTG ATGCTGACCA AGAGATTTTC ACCAATTTAT AAAATCAACA GATCATTCAT
GAGTATTGAC TCGGTCGTGG TACAATTTAT AACTTGCCCA GAGTCTCGGG GCAAGTTGGG
GCCTTTTTGC TCTACGTACT TTGGAAAGGA AGCGGACTGC TGTCCCTTTT GCCGGACCGT
CGCGATCCCA TCGTGTTTAA CTATTGCCAA GCAGGTTGTC AATAG
|
|---|
| Protein sequence | MVNKAKEWYP KIGGTYRLMD DVPRGLAIAM RPVLKKRKFK EVIDLCSEDE SVETGKRSAC
STVKSGVRPT VPIDDGDLIE MSYKKDRINH RPLVYIDTEG GDDSIVSEDC YYPLMEWNKG
AARTCAGGDE TIKRPSFYLL HIQQRDKWSC GFRNLQMLLV TLVPSLPPEH IYFDNGSLNG
QAFRVPSLQQ LQASLERSWR AGYDPDGAQH YQNRILGKNS KIGAVEVSTT LVSGQVGAFL
LYVLWKGSGL LSLLPDRRDP IVFNYCQAGC Q
|
|---|
| |