Gene PHATRDRAFT_37436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37436 
Symbol 
ID7202314 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp145763 
End bp147155 
Gene Length1393 bp 
Protein Length431 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181667 
Protein GI219122676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.17911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTCGGT GGATAACACT TCTTTCGGCT GATTCAGTAT CTTTATCGGA TATTATTCTG 
GCTCCCTCAA ATTCTCTCGT GCAGCTAAGT AAGGACGCTT CTTTTCATCC CGGTTACTCC
GATACGAACA ACCATGTTAT GAACGGCGAC GGCTTCGGGG TGGGATGGTA CCACACCAAC
GTCGCAACAT GTCCTTACGA AGAAAGTGTA CACCCATTTC ACACGAAGGG CTTCCACGGA
TCCGACGAAC ATAAGGGCTC CAGCCAAACT TTAGCAGCGG TCTTTAAAGA TACTCAACCA
GCCTGGAATA ATGCAAATTT GCGGGAGATT TGCATGGCAA CCCGAAGCGA CTGCATCATT
GCTCACGTTC GTGCTGCTTC CAAGAACACC GGAGTCAGTC AGGCTAATTG CCACCCCTTT
AAAGCAGGAA GACTATTGTT TTGCCATAAT GGACGGATCG ATAATTTTTC GCTCATCCGG
AGAGCCATGA TGGCACACTT ATCCGACGAA GCCTACGTCG CTGTTCGTGG TACGACCGAT
TCCGAATGTA TCTTTGCCAT GATTCTGACC TACCTTGCTA GAGACGATAG TGGTGAGCCC
TCGCCCTTTG TCCAAACGAC TACATTTGGA CACAGTCGTA TTGCTGCGGC CATTAAGAAG
ACTTTGCGCA CGATCGAAAT TATGCTGCAC GAGCACGGTC TCACGGAGGG CTACTGCACC
TTCAATTTCT CATGTACAGA TGGAGAGTCG GTTGTTGTCA CGCGCTTTTG CGACAAGTCA
CCCGATATTC CACCACCTTC CCTGTATTTT GCTTACGGCA ATGCCCAGAG ATTGTATAGT
GAACTCACAA GCGAAGACCC TGTTTCGTTT GTTAGTCAGC AGAGTTCATC GGACGACAGT
TCGTTGGACA AGGCCGATTC CGACAACGGT AGTGATACTG ATTCGGAGAC GACCTATAAC
GAAAAACCAG TTCTTTTAGA CAAACTCGAA AGCAGGCCGG GCCGTCTCTT TCCCGATGTC
GATGCCCAGA CGGCCTGCTT TATTGTGGCC AGGTAAGTGT CTTACTGTTA GTTGTAGACA
CCTCCCTACT TCCTTGTTCT CGATCTGAGT TTTTGGCTCA CAAGCTTGCG AATGACCTGC
AATTTTTAGC AATCCTTTGA CTCGGACGCA CACATGGCAT CCAATGCCGC GTAACTCGAT
CATGTGGTGC ACGCGTGGAT CCCCTCCTGA GCTTCGTTTG TTGCGTTTGC GCTCTCGCAC
GGCCTCAATG CTACGCACGC ATCTGCCCAC GAAAGGCGAC TTGGGATTTT CGATTGTGTC
GACGCCTCCG ACGCTCAAGG ATCTAGAGTT CATGAACCTG ACGGAATCTG ATATTGTGGG
CCAGGCTGCC TAG
 
Protein sequence
MCRWITLLSA DSVSLSDIIL APSNSLVQLS KDASFHPGYS DTNNHVMNGD GFGVGWYHTN 
VATCPYEESV HPFHTKGFHG SDEHKGSSQT LAAVFKDTQP AWNNANLREI CMATRSDCII
AHVRAASKNT GVSQANCHPF KAGRLLFCHN GRIDNFSLIR RAMMAHLSDE AYVAVRGTTD
SECIFAMILT YLARDDSGEP SPFVQTTTFG HSRIAAAIKK TLRTIEIMLH EHGLTEGYCT
FNFSCTDGES VVVTRFCDKS PDIPPPSLYF AYGNAQRLYS ELTSEDPVSF VSQQSSSDDS
SLDKADSDNG SDTDSETTYN EKPVLLDKLE SRPGRLFPDV DAQTACFIVA SNPLTRTHTW
HPMPRNSIMW CTRGSPPELR LLRLRSRTAS MLRTHLPTKG DLGFSIVSTP PTLKDLEFMN
LTESDIVGQA A