Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37406 |
Symbol | |
ID | 7202342 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 57271 |
End bp | 58091 |
Gene Length | 821 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181652 |
Protein GI | 219122645 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.342197 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAATCA ACGCCAACAA AGCCGTCGCC CGTGGCGCGG CCCTGCAATC CGCTATCCTG TCACCCCGGT TCAAGGTCCT TCCCTACAAC ATTCACAAAT TCCAAGCCTG GCCCTTTCAA CTGTGATGGG ACGAGGACGC CAACGACGAG GCGCAAGGCA TGGAAGTGGA TGCCACCACG GGTGCCCAGC CAACCAATGC CGTTGTCATG TTTGACCGCA GTTTGTCCTT TACCATTGTG CGTCGGATGA CGTTAAACAG AACCAGGGAA CCTTCGCCGT GCTGGCGGAA TACAATAAAA AGGCCCTCAA ATACGGCTTG CCGGCTTTTG GAAACGCAAT TGCGACCTTT TCCGTGCAGG CGCCCATATC CGAGGAAGCC AAAAAAAATT GCGTCAACGT CAAAGAGGAT ATTCACGGTA TCATCCAACT GAGTTTGGCA CAAATGATGG AAGAGATTGC CAACAAGGAG GAATCCGAGA TGTCGGATCC TTCTCCCCTT AAGGATGGCG AGGAAGATGC CGCTCCGGAG AACAAGAAGA AGGTGAAAAA GACCAATTTG GTCTTTACCA CGACGCGTTC GTTGGAGTGG ACCGATGGCA AAATTCAAAA GGCGTACCAG GTTGAACTGG CCATGGTGCT CAAGGACAAA CTTGTGCAAG AACCGTCCGA CAAATGTAAC AAACTCAAGG CCTATATTTA CGGTATGCAG GACAAGGTTG GTTTGGATTC GGCTCTGGGA TTGTTCGGTA CCGACGCGGA AAAGGCCGCC TTTACTACCC AAAACGAAGC GATGGATAAT TGTCAGAGTC TTGACCAATA A
|
Protein sequence | MTINANKAVA RGAALQSAIL SPRFKDANDE AQGMEVDATT GAQPTNAVVM FDRSLSFTIN QGTFAVLAEY NKKALKYGLP AFGNAIATFS VQAPISEEAK KNCVNVKEDI HGIIQLSLAQ MMEEIANKEE SEMSDPSPLK DGEEDAAPEN KKKVKKTNLV FTTTRSLEWT DGKIQKAYQV ELAMVLKDKL VQEPSDKCNK LKAYIYGMQD KVGLDSALGL FGTDAEKAAF TTQNEAMDNC QSLDQ
|
| |