Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37393 |
Symbol | |
ID | 7202334 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 6002 |
End bp | 6960 |
Gene Length | 959 bp |
Protein Length | 228 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181648 |
Protein GI | 219122637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.392699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA CAGATGAAAT TACGGCTGCG TTGGATGAAC TCGGCATCTC GGCAAGTGAC CTTGGCGGGC CAGACAAAGA TTCGCCGCCA ACAAAGCTCC ATCCGATCAT AGCGTTCGGA ATTGGCGCAT TTTGTGTAGC TAATTTAGGA CTGTTGATGA GCCTGCCACC AGTCTTACGA GGCAAAGGTA CCTGGAAATT CATATACTGC TACTATCTTG AAACTTGGCT GTAGGGTGCT CTAAAAGTTG CAAATTTTGT TGAACATTAC AGGTGCCCCC TATTTACCGA CGTTCCAGAA GAATCTTGAC GCCATGTTTA GACAATTACG TCAGCAGGTA CGTTTTGACA ATATTGGCTT TCGAGCAGAA AGGTAATACG AAACTTTTCT CAAACACTAC TGTTCTTTTC CAACAATTAT CCCAGCCGCA TTTTCAAAAG CAAATTCGGG ACGGTACCAA GTTGACTTTT GTGGATCTCG GGAGTGGCGA TGGACGCGTC GTATTTCGAG CGGCAGCAGA AAATTTGTTC GTGAAAAGCA CTGGTTACGA GCTCAATCCC CTATTACACT TACTGGCATC GGGTCGGCGA TGGGTTGGAG GTCCTCGACA ATGGGAGTTG ACAACTTTCT ACTGCAGCGA CTTGTGGAAC GTCGATCTAC GACGAGCCAA TGTAGTGACA GTGGTAAGAC CGGCCCCACC TTGGCGTCCA CATCACCGCA CAGAAACAGA ATGGGTGTAA CAGCAAAAAT TGTTCCTAAC ATTCTATCTC CTCATCTATT AGTACGGACT GGGGCCTATC ATGAAAGATT TGGGCACGAA ATTGGAAAAT GAACTATCAC CAGGGTCGTT TATTCTATCG AATGTGTTTA CCTTTCCCGG TTGGAAACCT CAAAGCACCC AAGGGGGAAC CTACATTTAT CGCACACCTA ACTGCTGGCA GTCGGAAAAT CGATTGTAA
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Protein sequence | MKETDEITAA LDELGISASD LGGPDKDSPP TKLHPIIAFG IGAFCVANLG LLMSLPPVLR GKGAPYLPTF QKNLDAMFRQ LRQQPHFQKQ IRDGTKLTFV DLGSGDGRVV FRAAAENLFV KSTGYELNPL LHLLASGRRW VGGPRQWELT TFYCSDLWNV DLRRANVVTV YGLGPIMKDL GTKLENELSP GSFILSNVFT FPGWKPQSTQ GGTYIYRTPN CWQSENRL
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