Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28818 |
Symbol | CSN2 |
ID | 7202605 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 813688 |
End bp | 814992 |
Gene Length | 1305 bp |
Protein Length | 404 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | COP9 SigNalosome subunit 2 |
Protein accession | XP_002181810 |
Protein GI | 219122974 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000148677 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACGATGACG CCATGGAAGC AGAGTTCCAG TATACGGACG ACGAAGAGGA GCAGGACGAC GCCCAAGTCG AACTCGAGAA CGCCTACTAC AACAGCAAAT CCCTCCGCGA CGACGTCCCC GCTGCCGTGG CGAGCTTCGA ACATATTATT GCGCAAGAAT CGGCTGAACT GGCCAAGTCC GGCAGCGACA AAACATACGG ACCTTGGAGT TTTAAAGCCA TGAAGCAGCT CGTCAAGTTG CGGCTCCGCG TCGGCGACGA CGACGAAAAA CTCATGCAAG ACTACCGTCG TCTCCTCGAG TGCATTGCCC AGGGTGACGT TAGTCCCAAC GCCGTAGAAA AGGGCATCAA CGGGATGCTG GAACGCGTCG CAACCCTTTA CCAAGGATCC GTCTCCGCTA CGGCCAGCGG AGCGGTCGTC CCCAACGGAC ATCAGGATCC CCAAAAGATC GCACTCGCGG TATACGACGC TACCCTTCAG GTCTTTCATC CACAAACGGG AAACACCATC AACGAACGGC TGTGGTTCAA AACAAATCTC AAATACGGAC AACTACTGTA CGAAATGAAT GAAGCGAACA AACTGGAACA GGTTTTGAGA GATCTGCAAA CGAACATGCC GCCCGAAGAC TCGGGTTCCG CCTCGAGCAG TACACAGTCT ATGGAGATTT ACGCACTACA AATACAACTA TACAGTCGCC AAAAAGATCA CAAACGGTTA CGTGAAACCT TCCAGAAGGC CATGGCCGTT CGGGGCGGTA TTCCACATCC CCGGACCATT GCCTTGATTC AAGAACTCGG CGGCAAAACG CACATGGCTT CGCGGGAGTA CAACCAGGCC GAAAAGACCT TCTTCCAAGC TTTCAAATCG TACGACGAAG CCGGCGATCC GTCGCGGCTA CGCTGTCTTA AGTATCTCGT ACTCGCGAGT ATGCTCCACG CGTCCGCGAT CAATCCCTTC GATTCCCAGG AAGCCCGTCC CTACCGAGAC GACCCCGAGA TTGTCGCCAT GACCAATCTC GTTCAAGCCT TCCATGCCAA CGATATTGCT AAATTCGAGC GCGTCCTGCG GCAGAATCGT CGCACGCTCC ACGATGAATT TATCAACGAA CATGTGCAGG ATTTATTGCG CACCATCCGC ACGCAGGTGC TCGAGCGTAT GGTCCGACCC TACCGACGCA TTTCGCTCCA CGCTCTGGCG GAGCAACTTA ACCATATTGA AATTTCGCAG GTAGAATCAC TCTTGACGTC CCTCATTCTC AATGGTACCT TGCAGGGTAA AATCGATCGG GTGGATATGG TGTTG
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Protein sequence | MEAEFQYTDD EEEQDDAQVE LENAYYNSKS LRDDVPAAVA SFEHIIAQES AELAKSGSDK TYGPWSFKAM KQLVKLRLRV GDDDEKLMQD YRRLLECIAQ GDVSPNAVEK GINGMLERIA LAVYDATLQV FHPQTGNTIN ERLWFKTNLK YGQLLYEMNE ANKLEQVLRD LQTNMPPEDS GSASSSTQSM EIYALQIQLY SRQKDHKRLR ETFQKAMAVR GGIPHPRTIA LIQELGGKTH MASREYNQAE KTFFQAFKSY DEAGDPSRLR CLKYLVLASM LHASAINPFD SQEARPYRDD PEIVAMTNLV QAFHANDIAK FERVLRQNRR TLHDEFINEH VQDLLRTIRT QVLERMVRPY RRISLHALAE QLNHIEISQV ESLLTSLILN GTLQGKIDRV DMVL
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