Gene PHATRDRAFT_28818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28818 
SymbolCSN2 
ID7202605 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp813688 
End bp814992 
Gene Length1305 bp 
Protein Length404 aa 
Translation table 
GC content54% 
IMG OID 
ProductCOP9 SigNalosome subunit 2 
Protein accessionXP_002181810 
Protein GI219122974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000148677 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGATGACG CCATGGAAGC AGAGTTCCAG TATACGGACG ACGAAGAGGA GCAGGACGAC 
GCCCAAGTCG AACTCGAGAA CGCCTACTAC AACAGCAAAT CCCTCCGCGA CGACGTCCCC
GCTGCCGTGG CGAGCTTCGA ACATATTATT GCGCAAGAAT CGGCTGAACT GGCCAAGTCC
GGCAGCGACA AAACATACGG ACCTTGGAGT TTTAAAGCCA TGAAGCAGCT CGTCAAGTTG
CGGCTCCGCG TCGGCGACGA CGACGAAAAA CTCATGCAAG ACTACCGTCG TCTCCTCGAG
TGCATTGCCC AGGGTGACGT TAGTCCCAAC GCCGTAGAAA AGGGCATCAA CGGGATGCTG
GAACGCGTCG CAACCCTTTA CCAAGGATCC GTCTCCGCTA CGGCCAGCGG AGCGGTCGTC
CCCAACGGAC ATCAGGATCC CCAAAAGATC GCACTCGCGG TATACGACGC TACCCTTCAG
GTCTTTCATC CACAAACGGG AAACACCATC AACGAACGGC TGTGGTTCAA AACAAATCTC
AAATACGGAC AACTACTGTA CGAAATGAAT GAAGCGAACA AACTGGAACA GGTTTTGAGA
GATCTGCAAA CGAACATGCC GCCCGAAGAC TCGGGTTCCG CCTCGAGCAG TACACAGTCT
ATGGAGATTT ACGCACTACA AATACAACTA TACAGTCGCC AAAAAGATCA CAAACGGTTA
CGTGAAACCT TCCAGAAGGC CATGGCCGTT CGGGGCGGTA TTCCACATCC CCGGACCATT
GCCTTGATTC AAGAACTCGG CGGCAAAACG CACATGGCTT CGCGGGAGTA CAACCAGGCC
GAAAAGACCT TCTTCCAAGC TTTCAAATCG TACGACGAAG CCGGCGATCC GTCGCGGCTA
CGCTGTCTTA AGTATCTCGT ACTCGCGAGT ATGCTCCACG CGTCCGCGAT CAATCCCTTC
GATTCCCAGG AAGCCCGTCC CTACCGAGAC GACCCCGAGA TTGTCGCCAT GACCAATCTC
GTTCAAGCCT TCCATGCCAA CGATATTGCT AAATTCGAGC GCGTCCTGCG GCAGAATCGT
CGCACGCTCC ACGATGAATT TATCAACGAA CATGTGCAGG ATTTATTGCG CACCATCCGC
ACGCAGGTGC TCGAGCGTAT GGTCCGACCC TACCGACGCA TTTCGCTCCA CGCTCTGGCG
GAGCAACTTA ACCATATTGA AATTTCGCAG GTAGAATCAC TCTTGACGTC CCTCATTCTC
AATGGTACCT TGCAGGGTAA AATCGATCGG GTGGATATGG TGTTG
 
Protein sequence
MEAEFQYTDD EEEQDDAQVE LENAYYNSKS LRDDVPAAVA SFEHIIAQES AELAKSGSDK 
TYGPWSFKAM KQLVKLRLRV GDDDEKLMQD YRRLLECIAQ GDVSPNAVEK GINGMLERIA
LAVYDATLQV FHPQTGNTIN ERLWFKTNLK YGQLLYEMNE ANKLEQVLRD LQTNMPPEDS
GSASSSTQSM EIYALQIQLY SRQKDHKRLR ETFQKAMAVR GGIPHPRTIA LIQELGGKTH
MASREYNQAE KTFFQAFKSY DEAGDPSRLR CLKYLVLASM LHASAINPFD SQEARPYRDD
PEIVAMTNLV QAFHANDIAK FERVLRQNRR TLHDEFINEH VQDLLRTIRT QVLERMVRPY
RRISLHALAE QLNHIEISQV ESLLTSLILN GTLQGKIDRV DMVL