| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_28737 |
|---|
| Symbol | |
|---|
| ID | 7202458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | + |
|---|
| Start bp | 601326 |
|---|
| End bp | 602908 |
|---|
| Gene Length | 1583 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181593 |
|---|
| Protein GI | 219122524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.723788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTCACACATA TCTCTCGATA ATAGAGCGTG CAATAGCAGT CACCATGGGA AAGGAAAAGG
TTCACATTAG TTTGGTCGTC ATCGGACACG TCGATGCTGG TAAGTTAGCA ATGACAAATC
TTACAAGGGT GGGAGAACGT TGACAGGAAG GTCGAAGAGG AATTTTTCAT TCGTAGTAGG
ATTGGCTTCG TTGTGACGTT AGTAGTATAC GGTTTAGAGC CTTCTCCATT GACTTTTTCT
AACGGATGAT TTTTGACGCG GTTTACAGGA AAATCCACCA CCACAGGTCA TTTGATCTAC
AAATGTGGAG GAATCGATAA GCGTACCATC GAAAAGTTCG AAAAGGAAGC CGCCGAACTC
GGAAAGGGAT CCTTCAAGTA TGCATGGGTC CTCGATAACC TCAAGGCCGA ACGTGAACGT
GGTATCACCA TCGATATTGC GCTGTGGAAG TTTGAGTCTC CCAAGTACTC TTTTACCGTT
ATTGATGCCC CTGGACATCG TGATTTCATC AAGAACATGA TCACCGGAAC TTCCCAGGCT
GATGTTGCTG TTCTCGTTAT TGACTCGTCC CAGGGAGGGT TCGAAGCCGG TATCTCTAAG
GACGGACAGA CCCGCGAACA CGCGCTTCTC GCCTACACTC TTGGAGTGAA GCAGATGATT
GTTGCCATGA ACAAGATGGA CGACAAGACT GTCAAATACG CCGAAGATCG TTACACCGAA
ATTAAGAATG AAGTCTCTGC CTACCTCAAG AAGGTTGGCT ACAAGCCGAT GAAGATTCCA
TTCGTCCCCA TCTCCGGTTG GGAGGGTGAC AACATGGTGG AAAAGTCCAC TAACATGGCC
TGGTACAAGG GACCTTACCT GCTCGAGGCC CTTGACAGTG TAACCCCGCC CAAGCGTCCC
ACCGACAAGG CTCTACGACT TCCCCTCCAG GATGTCTACA AGATCGGTGG TATCGGAACA
GTCCCGGTCG GCCGCGTCGA GACCGGAGTC ATCAAGCCTG GTATTCACGC TATGTTCGCC
CCGTCCGGTA TTATTGCCGA AATTAAGTCT GTCGAGATGC ACCACGAATC CCTTCCCGAA
GCGGTTCCTG GTGACAATGT TGGTTTCAAC GTCAAGAACG TAGCCGTCAA GGATCTGCGC
CGTGGCTTTG TCGCTTCTGA CTCGAAAGCT AGCCCCGCTT CGGGTGTTTC TTCTTTCGAG
GCTCAGGTTA TTGTCATGAA CCATCCCGGT CAGATCTCCA ACGGATACTC TCCCGTTCTT
GATTGCCACA CGGCTCACGT TGCTTGCAAA TTCGCCCTTA TCAAGGAGAA GATGGATCGC
CGAAGTGGAA AGGTTTTGGA ACAGAACCCC AAGTTTGTTA AAACTGGAGA CGCCTGCATT
GTAGACCTCG AGCCTACTAA GCCCTTGTGT GTTGAGAGCT TTACCGATTT CCCCCCGCTT
GGTCGTTTCG CTGTGCGTGA CATGCGTCAG ACCGTGGCTG TTGGTGTCAT TAAGGCTACT
ACCAAGGAAG AAGGCGGCAA GAAGAAGAAA TAAACAATGT GATTCGTCTT CTAAACACAA
TTGATTGACA TTACAAAATC TTT
|
|---|
| Protein sequence | MGKEKVHISL VVIGHVDAGK STTTGHLIYK CGGIDKRTIE KFEKEAAELG KGSFKYAWVL
DNLKAERERG ITIDIALWKF ESPKYSFTVI DAPGHRDFIK NMITGTSQAD VAVLVIDSSQ
GGFEAGISKD GQTREHALLA YTLGVKQMIV AMNKMDDKTV KYAEDRYTEI KNEVSAYLKK
VGYKPMKIPF VPISGWEGDN MVEKSTNMAW YKGPYLLEAL DSVTPPKRPT DKALRLPLQD
VYKIGGIGTV PVGRVETGVI KPGIHAMFAP SGIIAEIKSV EMHHESLPEA VPGDNVGFNV
KNVAVKDLRR GFVASDSKAS PASGVSSFEA QVIVMNHPGQ ISNGYSPVLD CHTAHVACKF
ALIKEKMDRR SGKVLEQNPK FVKTGDACIV DLEPTKPLCV ESFTDFPPLG RFAVRDMRQT
VAVGVIKATT KEEGGKKKK
|
|---|
| |