Gene PHATRDRAFT_28723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28723 
Symbol 
ID7202450 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp572116 
End bp573051 
Gene Length936 bp 
Protein Length175 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181755 
Protein GI219122860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.627858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACACCAGATA ACAGTTCTGA AAGCCTGAAA TACAGAACAA GCGCTATTCT AGCATGACAA 
CTCTCCGGCA GTTTCAACTG AACGATCTCT TAAAATTCAA CCAAATCAAT TTGGATGTCC
TGGTACGTTA CTGTTCCGTT TCGCATACGT TGGCTCATCC TATCCCTACA CCGATTCAAC
CCTGACAGCT GCACAATTCT GTAGACTGAA ACATACAACG GTTCGTTTTA CATGGCATAC
CTTTCCAAAT GGCCAGAATC GTTTGTTGGT AAGTTTGTCA ATATATTCGC GAAGCTAGTG
ATGCCCATCA TCATTACCGC TTCTCACAAT ATCGGTGTTT GTAATTTGTT TTTTAGTGGC
GGAATCTCCC CATGGATCGC TTATGGGTTA CGTGTTGGGA AAGGCCGAAG GTGAAGGGAA
GCAATGGCAC GGTCATGTCT CTGCCGTTAC GGTGGCACCA GAATACAGGC GTTTGGGTTT
GGCACAAACG CTGATGACCT ACTTTGAAAC GCTAAGCGTT CAACAGTATA ATGCTTACTT
TGTGGATTTG TTTGTGCGCG CTTCCAACAC GTTAGCGATT GATATGTATA ATAAGTTTGG
CTACGTTACA TACCGGAGAG TACTGGGTTA CTATTCCGGT GAACTACCTG AGGATGCTTT
AGATATGAGA AAAGCTTTGC CGAGGTAAGT CAACCCGCAA TGGGCTGTTG AATTAATTAA
TATAAGGCAA TAACACGGGT TTTTCTTCGA CTTTTGCAGA GATAAGGACA AGGAAAGCAT
CGTTCCTCTC CAATATCCCG TGCTTCCCGA AGATTTGGAA TGGTAGTTTG CATTGGCAGT
CAGATAATAG CTTTCGCTGC GGAGTTGCCT TGGTGGGAGA AATAACATTT AGTATAGGCT
CATCATAAAC TAGCTGTAAG AAACGTTTCT AGTCCC
 
Protein sequence
MTTLRQFQLN DLLKFNQINL DVLTETYNGS FYMAYLSKWP ESFVVAESPH GSLMGYVLGK 
AEGEGKQWHG HVSAVTVAPE YRRLGLAQTL MTYFETLSVQ QYNAYFVDLF VRASNTLAID
MYNKFGYVTY RRVLGYYSGE LPEDALDMRK ALPRDKDKES IVPLQYPVLP EDLEW