Gene PHATRDRAFT_21592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21592 
Symbol 
ID7202547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp556788 
End bp558429 
Gene Length1642 bp 
Protein Length481 aa 
Translation table 
GC content53% 
IMG OID 
Productdiaminopimelate decarboxylase 
Protein accessionXP_002181752 
Protein GI219122853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAACGCACA AAAAGCACTG ACTGTGACTT CGTGTGGAAG AAAGTTGACA GACAGTGAGC 
GGCCGAAGAC GCTTGGGACA GTGAACCTGC CACACCCGTT GCAATTTCTT GCTTACTCCT
AAACGCACAC TAACAGTCTT GGGTTTTCGT TTATCCTCAA TCTCCTTCCT TCCACACGCA
CCAAAGCACT TCCACGATGA GAATGTCTAC TGCTGCTCTG CTCTGCTCAG TTTACACAGC
CGGAAGCACT GCCGCGTTTG CTCCCGCTTT GCTTACGCGG CGATACTCCT CGTCATCATC
GACCTTGTCT GCTACGACGA ATCCGTTACA GTCTATCTTT TTGACGCCCG AAACTGCCAA
GGCCTGCATT GATGCCGCCG GTGGGACACC TCTGTACGCG TACAGTATCG ACAAGCTGGA
GGAAGCCGCC GATGCCTGTC TAGCTTTTCC CAACGCGTAC GGACTGACGG TACGCTACGC
CATGAAAGCC TGTCCCAACG CGTCCATTCT CAAGTATTTT CACTCGAAAA ATATTCACGT
TGACGCATCT TCCGGTTTCG AAGTACGCCG GGCGATGGAT GCCGGTGTTC CGGCCGAAAA
TATCTCCCTG AGTACGCAGG AGTTGCCCGA AGACTTTGCG GCACTGGTTG ATATGGGTGT
CAAGCTCAAT GCTTGTTCCG TCTCGCAGCT AGAGCGGTTC GGTGAGCACT ATGCTGGAAA
AGGTGCGAAG GTGGGCGTCC GAGTGAATCC GGGAGTGGGG TCGGGAGGCT TCTCCGCGAG
TACCACTGGA TTCAGTAAAA CTAATGTCGG CGGACCGAGC AGTTCGTTCG GGATTTGGCA
CGAACTCGTC ACCGATGGAA CCGTCCCAGA TATCGTGGAA AGGTACGGTT TGGAAGTGGA
ACGTATTCAT ACACATATTG GATCAGGTAG TGATCCGGAG ATTTGGCAGC AAGTTGCCAC
CAAATCCTTG TCCTTTTGCA AGGTGTTTCC CACCGTCAAA ACCATGAATC TTGGTGGCGG
CTACAAGGTG GGACGCAACA AGGGCGAAGT TACGACAGAT TTGCAGAAAA TCGGGAAGCC
TGTGGCGGAT GCCTTTAAAA AGTTCGCGGA AAAGGAAGGC CGGGAATTGC AAATGGAAAT
TGAGCCCGGA ACTTATCTCG TGGCCATGGC TGGAGCACTC GTCTCCAAGG TCCAAGACAA
GGTTCACACC ACCGGAGAGA ATAGCCACAC CTTCTTGAAG CTTGATGCCG GCATGACGGA
CGTCTTGCGC CCGAGCTTGT ATGGTGCCGT GCATCCTATT ACGATTCTGC CCGGGTCGGG
AAATTCTGCC GACGTTGGCG ATGAAACCGA ATCTGTAGTG GTGGTTGGAC ATTGTTGTGA
ATCAGGGGAC CTCATGACTC CGGCCCCGGG TGAGCCGGAA CAACTAGCGG AACAAGAACT
TCGTGCGGCA GCGGTAGGTG ATATTCTAGT GATGGATGGC TCTGGGGCGT ACTGCTCCGG
CATGTCGACG AAGAACTACA ACAGCTTTCC CGAAGCACCA GAAGTGTTGG TGGACAAGGC
AGGCAAGGCA CACTTGATCC GTAAACGACA AACCCTGAGT CAAATTTACG AGAACGAAAT
CTCCGTAGAA GGCGTGTTTT AA
 
Protein sequence
MRMSTAALLC SVYTAGSTAA FAPALLTRRY SSSSSTLSAT TNPLQSIFLT PETAKACIDA 
AGGTPLYAYS IDKLEEAADA CLAFPNAYGL TVRYAMKACP NASILKYFHS KNIHVDASSG
FEVRRAMDAG VPAENISLST QELPEDFAAL VDMGVKLNAC SVSQLERFGE HYAGKGAKVG
VRVNPGVGSG GFSASTTGFS KTNVGGPSSS FGIWHELVTD GTVPDIVERY GLEVERIHTH
IGSGSDPEIW QQVATKSLSF CKVFPTVKTM NLGGGYKVGR NKGEVTTDLQ KIGKPVADAF
KKFAEKEGRE LQMEIEPGTY LVAMAGALVS KVQDKVHTTG ENSHTFLKLD AGMTDVLRPS
LYGAVHPITI LPGSGNSADV GDETESVVVV GHCCESGDLM TPAPGEPEQL AEQELRAAAV
GDILVMDGSG AYCSGMSTKN YNSFPEAPEV LVDKAGKAHL IRKRQTLSQI YENEISVEGV
F