Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_21592 |
Symbol | |
ID | 7202547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | - |
Start bp | 556788 |
End bp | 558429 |
Gene Length | 1642 bp |
Protein Length | 481 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | XP_002181752 |
Protein GI | 219122853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAACGCACA AAAAGCACTG ACTGTGACTT CGTGTGGAAG AAAGTTGACA GACAGTGAGC GGCCGAAGAC GCTTGGGACA GTGAACCTGC CACACCCGTT GCAATTTCTT GCTTACTCCT AAACGCACAC TAACAGTCTT GGGTTTTCGT TTATCCTCAA TCTCCTTCCT TCCACACGCA CCAAAGCACT TCCACGATGA GAATGTCTAC TGCTGCTCTG CTCTGCTCAG TTTACACAGC CGGAAGCACT GCCGCGTTTG CTCCCGCTTT GCTTACGCGG CGATACTCCT CGTCATCATC GACCTTGTCT GCTACGACGA ATCCGTTACA GTCTATCTTT TTGACGCCCG AAACTGCCAA GGCCTGCATT GATGCCGCCG GTGGGACACC TCTGTACGCG TACAGTATCG ACAAGCTGGA GGAAGCCGCC GATGCCTGTC TAGCTTTTCC CAACGCGTAC GGACTGACGG TACGCTACGC CATGAAAGCC TGTCCCAACG CGTCCATTCT CAAGTATTTT CACTCGAAAA ATATTCACGT TGACGCATCT TCCGGTTTCG AAGTACGCCG GGCGATGGAT GCCGGTGTTC CGGCCGAAAA TATCTCCCTG AGTACGCAGG AGTTGCCCGA AGACTTTGCG GCACTGGTTG ATATGGGTGT CAAGCTCAAT GCTTGTTCCG TCTCGCAGCT AGAGCGGTTC GGTGAGCACT ATGCTGGAAA AGGTGCGAAG GTGGGCGTCC GAGTGAATCC GGGAGTGGGG TCGGGAGGCT TCTCCGCGAG TACCACTGGA TTCAGTAAAA CTAATGTCGG CGGACCGAGC AGTTCGTTCG GGATTTGGCA CGAACTCGTC ACCGATGGAA CCGTCCCAGA TATCGTGGAA AGGTACGGTT TGGAAGTGGA ACGTATTCAT ACACATATTG GATCAGGTAG TGATCCGGAG ATTTGGCAGC AAGTTGCCAC CAAATCCTTG TCCTTTTGCA AGGTGTTTCC CACCGTCAAA ACCATGAATC TTGGTGGCGG CTACAAGGTG GGACGCAACA AGGGCGAAGT TACGACAGAT TTGCAGAAAA TCGGGAAGCC TGTGGCGGAT GCCTTTAAAA AGTTCGCGGA AAAGGAAGGC CGGGAATTGC AAATGGAAAT TGAGCCCGGA ACTTATCTCG TGGCCATGGC TGGAGCACTC GTCTCCAAGG TCCAAGACAA GGTTCACACC ACCGGAGAGA ATAGCCACAC CTTCTTGAAG CTTGATGCCG GCATGACGGA CGTCTTGCGC CCGAGCTTGT ATGGTGCCGT GCATCCTATT ACGATTCTGC CCGGGTCGGG AAATTCTGCC GACGTTGGCG ATGAAACCGA ATCTGTAGTG GTGGTTGGAC ATTGTTGTGA ATCAGGGGAC CTCATGACTC CGGCCCCGGG TGAGCCGGAA CAACTAGCGG AACAAGAACT TCGTGCGGCA GCGGTAGGTG ATATTCTAGT GATGGATGGC TCTGGGGCGT ACTGCTCCGG CATGTCGACG AAGAACTACA ACAGCTTTCC CGAAGCACCA GAAGTGTTGG TGGACAAGGC AGGCAAGGCA CACTTGATCC GTAAACGACA AACCCTGAGT CAAATTTACG AGAACGAAAT CTCCGTAGAA GGCGTGTTTT AA
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Protein sequence | MRMSTAALLC SVYTAGSTAA FAPALLTRRY SSSSSTLSAT TNPLQSIFLT PETAKACIDA AGGTPLYAYS IDKLEEAADA CLAFPNAYGL TVRYAMKACP NASILKYFHS KNIHVDASSG FEVRRAMDAG VPAENISLST QELPEDFAAL VDMGVKLNAC SVSQLERFGE HYAGKGAKVG VRVNPGVGSG GFSASTTGFS KTNVGGPSSS FGIWHELVTD GTVPDIVERY GLEVERIHTH IGSGSDPEIW QQVATKSLSF CKVFPTVKTM NLGGGYKVGR NKGEVTTDLQ KIGKPVADAF KKFAEKEGRE LQMEIEPGTY LVAMAGALVS KVQDKVHTTG ENSHTFLKLD AGMTDVLRPS LYGAVHPITI LPGSGNSADV GDETESVVVV GHCCESGDLM TPAPGEPEQL AEQELRAAAV GDILVMDGSG AYCSGMSTKN YNSFPEAPEV LVDKAGKAHL IRKRQTLSQI YENEISVEGV F
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