Gene PHATRDRAFT_21501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21501 
Symbol 
ID7202331 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp232773 
End bp233453 
Gene Length681 bp 
Protein Length175 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181684 
Protein GI219122711 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AACCGGAATG GATAAGTGAG TACAGGACAA TCGTATTTGA GCTTTTAGAG ACTCGGATTT 
ACCTAACAGT TAAAACTTTT CCTTCGCTCC AGACCTGCCG TGTCTTTGGG ACTTGAGCTA
CTGAACAGTG TCTTCGGGAA GCCTTGGAGT GAAAAATGCA GAGAAATTAG AGAGGCTTCC
CCTTATGGAG AAGTACAAGG TTGGAGACTT GCATCTTTCC TTATGAAGGC TGGCGAAGAT
ATACGAAGAG AGGCTCTCGT CATGCAGATT ATATCCAAAC TGCGGAACTG GTTTGATGAG
GAAATTCCTA TTGCTCACAG ACCGTATATG CGTCCATACA CGATTATGTG CGTTGGCGGA
GATGCTGGGT TGATCGAGTG TCTATCAGAT GCCAAAAGTA TTGATGAGGT TAAGAAGCAA
ACTGATAGTT TCACGACGCT CCGCGACTAT TTCGAGCGAG CCTATGGCCC CCCTACTCGG
CGAAAGAGTG GCTATGGTCC GCCCCCATTG CCATCATCTA GTAGCCTTGC TTCGGTTTCT
TCTTTTGAGA CAGCACAAGA CAACTTCCTA CGGTCTTTAG TCGGCTACAG CGTTGTGTGC
TATGTACTTC AAATCAAAGA TCGTCACAAC GCAAATATCC TGTTAGATCG AGAAGGCCAT
ATTATGCACA TAGACTTTGG A
 
Protein sequence
MDKPAVSLGL ELLNSVFGKP WSEKCREIRE ASPYGEVQGW RLASFLMKAG EDIRREALVM 
QIISKLRNWF DEEIPIAHRP YMRPYTIMCV GGDAGLIECL SDAKSIDEVK KQTDSFTTLR
DYFERAYGPP TRRKNNFLRS LVGYSVVCYV LQIKDRHNAN ILLDREGHIM HIDFG