Gene PHATRDRAFT_14103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14103 
Symbol 
ID7202566 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp635342 
End bp636589 
Gene Length1248 bp 
Protein Length298 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181603 
Protein GI219122545 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.552614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTGTTTTAC TTATGGGTCC CAGACGAGGT GGGAAAACCA GTATCCAGGC AAGTCACGGT 
GGTCCACCAA CTTCAATATT ACCGTCCCCT TCCCACTGTC ATTGATCTTC TAACACCTTG
CTTTCCTCGC GGGCTTTTTC GCGACCACAG AGAGTTGTTT TTCAAAAGAT GTCTCCACAC
GAAACGCTAT TTCGCTTGGA AGCGACACAA CAGACCGAGC GTGCTTTGGT GGATCATACA
TCGCTTTGTC GCTTCACTAT TCTCGACTTC CCGGGAGACG ACTACGGAGG CGAAACGATG
GTCTTTGATG GGCCTACTAC ACTCCTGTTT GTCGTTGACG CTCAAGATGA ACCCTACGAC
CACGTTCTGC AGTCGTTTTC CAATGTGGTT ACCCGTGCAC TTAGTGTCAA TCCACAAATC
TCCATCGAAG TCTTTATTCA CAAAGTCGAT GGTGAGCTGT TTTTGAGCGA TGAATCCAAG
TACGATTGTC GAAGGGATGT TATGTCGCAG GTTTCGGAAG AGCTCGCTGA TGCGGGGGTC
GGCATGGACG CCGTGCAGAT TCGCTACCAC TTAACATCCA TTTACGATCA TTCTGTTTAC
GAAGCTTTCA GCAGGGTCGT CCAAAGACTG ATTCCACAAT TGCCTACCCT TGAGAATCTA
TTAAACGTGT TGGTTTCCAC CTGCTCAATG GAAAAAGCCT ATCTATTTGA CGTCGTGAGT
AAGCTCTATA TTTCAACAGA TTCTGGGCCC GTCGATACGC AATCTGTCGA GCTCTGTTCA
GACATGATAG ACGTTGTGCT GGACGTCAGT GGCATTTATG GACTGGGCCC TTCCCACGCC
TCCATCCAGC GGGCATCTCA ATCGGAAGCG GCTCCGCATA CAGCCAGCCT CAGCACCAAC
AACGATGGTG AAGGGGCGGG TGGCGCCCTG ATTAGTCAAT CCGCCGCCGA CGATTTGGAA
GACGAAATGG TGGACCCAGA TTCCGCATAT GACAGGGAGT CGGCGAGTGT CATTCGTCTC
AGCAACGGAA TGGTACGATT ATTAGTTCGC ATGGATGAGG TAAAACGCAA ATCCTCGATA
GAAAATTCAC TCATTTGTTC TGAATATCTG CAGGTACTCT ACTTGAAAGA AGTTGACACC
ATGCTTGCTC TAGTTTGTAT CACGCGGTCT GAAAACTTTC GGAAAAAGTC TCTCATCAAT
TACAACATTG GTTGTTTGAA GAAAGCTCTG TTGGCGCTTG CCGAGCCT
 
Protein sequence
RVLLMGPRRG GKTSIQAIVF QKMSPHETLF RLEATQQTER ALVDHTSLCR FTILDFPGDD 
YGGETMVFDG PTTLLFVVDA QDEPYDHVLQ SFSNVVTRAL SVNPQISIEV FIHKVDGELF
LSDESKYDCR RDVMSQVSEE LADAGVGMDA VQIRYHLTSI YDHSVYEAFS RVVQRLIPQL
PTLENLLNVL VSTCSMEKAY LFDVVSKLYI STDSGPVDTQ SVELCSDMID VVLDVNSAYD
RESASVIRLS NGMVLYLKEV DTMLALVCIT RSENFRKKSL INYNIGCLKK ALLALAEP