Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14090 |
Symbol | |
ID | 7202550 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | + |
Start bp | 570434 |
End bp | 571410 |
Gene Length | 977 bp |
Protein Length | 219 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181584 |
Protein GI | 219122505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG CCACTGTGTG TACTTCTAGT AAAAAAGAGA GCAGTCGTCG TCGAATTATG GTTTGCGCTC CAACCAACAA GGCTATTGCT GTCTTAGCCT CACGCTTCTT GGCGTCAGTT TATCCAAACG AAGATTCTTC TACTGTTTTC AATGCAGTAA TGGTGGGTGA TGCCGAAAAG CTTCTTGTAG ACGAGCGAAA TCGTACCGTG AAGTCCAACG TTCCGGATAC GCTACCGCTC AAATCAATTT TCGTGTTTTC CTGGATGCAG GGTGTGGTAC GTGCTTTTCT GTATGTACAA TGCGAGATTC GTATAGCTCG CTAATATTCC CCTTTTTGCT GTAGATGGAC GATTATCGCA GTATTAAAAA CTTTTTTGTA CCTGGCCAAG TCCGCGGCTG GGAGCGTGAG GACTTGTACA AACTTGCTCG CCGATTGGAG ACTCGCCTCA TCTCCAGTCT TCCCGGTATG CCAACATCTG TCGGCAAGCT AGCTTCCAAA ATTTCCAACA GCTTGAAACG TCTAGAGAGT GGAGGTGCAG CGCACGGGAT TGTTGAAAAT ATTGACAAAG TACTACAGCA GCTGAAGGAC ATGCCGCAAG ATCACATCTA TCGAGAACTG CTACTTTCTG CCGACATCAT CTTTTGTACA TTGGCTAGTG CAGGAGGCTT GCTCTTGCGT ATGACGTCCA GAATTGATGA CTTGATTGTC GACGAAGCCG CTGCTGCCAC TGAGCCGGAG CTTTGCATTC CACTTCACCT TCAACCGTCG CGTCTTTTGT GTGTTGGGGA CCCCAAGCAA TTACCGGCGA CTCTGCTCTC GCGCAAGGCT GTTGACCTGG GATTGAGCAA GAGTTTGCAG GAGCGTCTCA TGTATGATTG TAAACAACAA CATATAATGC TGGATGTGCA GTATCGAATG AACCCTCAAA TCTCAAGCTT TCCCTCCAGA TGCTTTTACG AGGACAAAAT TCAGAAC
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Protein sequence | MKFATVCTSS KKESSRRRIM VCAPTNKAIA DLYKLARRLE TRLISSLPGM PTSVGKLASK ISNSLKRLES GGAAHGIVEN IDKVLQQLKD MPQDHIYREL LLSADIIFCT LASAGGLLLR MTSRIDDLIV DEAAAATEPE LCIPLHLQPS RLLCVGDPKQ LPATLLSRKA VDLGLSKSLQ ERLMYDCKQQ HIMLDVQYRM NPQISSFPSR CFYEDKIQN
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