Gene PHATRDRAFT_14090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14090 
Symbol 
ID7202550 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp570434 
End bp571410 
Gene Length977 bp 
Protein Length219 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181584 
Protein GI219122505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTG CCACTGTGTG TACTTCTAGT AAAAAAGAGA GCAGTCGTCG TCGAATTATG 
GTTTGCGCTC CAACCAACAA GGCTATTGCT GTCTTAGCCT CACGCTTCTT GGCGTCAGTT
TATCCAAACG AAGATTCTTC TACTGTTTTC AATGCAGTAA TGGTGGGTGA TGCCGAAAAG
CTTCTTGTAG ACGAGCGAAA TCGTACCGTG AAGTCCAACG TTCCGGATAC GCTACCGCTC
AAATCAATTT TCGTGTTTTC CTGGATGCAG GGTGTGGTAC GTGCTTTTCT GTATGTACAA
TGCGAGATTC GTATAGCTCG CTAATATTCC CCTTTTTGCT GTAGATGGAC GATTATCGCA
GTATTAAAAA CTTTTTTGTA CCTGGCCAAG TCCGCGGCTG GGAGCGTGAG GACTTGTACA
AACTTGCTCG CCGATTGGAG ACTCGCCTCA TCTCCAGTCT TCCCGGTATG CCAACATCTG
TCGGCAAGCT AGCTTCCAAA ATTTCCAACA GCTTGAAACG TCTAGAGAGT GGAGGTGCAG
CGCACGGGAT TGTTGAAAAT ATTGACAAAG TACTACAGCA GCTGAAGGAC ATGCCGCAAG
ATCACATCTA TCGAGAACTG CTACTTTCTG CCGACATCAT CTTTTGTACA TTGGCTAGTG
CAGGAGGCTT GCTCTTGCGT ATGACGTCCA GAATTGATGA CTTGATTGTC GACGAAGCCG
CTGCTGCCAC TGAGCCGGAG CTTTGCATTC CACTTCACCT TCAACCGTCG CGTCTTTTGT
GTGTTGGGGA CCCCAAGCAA TTACCGGCGA CTCTGCTCTC GCGCAAGGCT GTTGACCTGG
GATTGAGCAA GAGTTTGCAG GAGCGTCTCA TGTATGATTG TAAACAACAA CATATAATGC
TGGATGTGCA GTATCGAATG AACCCTCAAA TCTCAAGCTT TCCCTCCAGA TGCTTTTACG
AGGACAAAAT TCAGAAC
 
Protein sequence
MKFATVCTSS KKESSRRRIM VCAPTNKAIA DLYKLARRLE TRLISSLPGM PTSVGKLASK 
ISNSLKRLES GGAAHGIVEN IDKVLQQLKD MPQDHIYREL LLSADIIFCT LASAGGLLLR
MTSRIDDLIV DEAAAATEPE LCIPLHLQPS RLLCVGDPKQ LPATLLSRKA VDLGLSKSLQ
ERLMYDCKQQ HIMLDVQYRM NPQISSFPSR CFYEDKIQN