| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_14068 |
|---|
| Symbol | |
|---|
| ID | 7202433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011681 |
|---|
| Strand | + |
|---|
| Start bp | 486300 |
|---|
| End bp | 487388 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181568 |
|---|
| Protein GI | 219122472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.763403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGG TACCTTGTCG TGGAAAACCT CGTTTCTCTA CTGTGAGTAT CGCGATCCCT
GGATCGGTTG TTTCCAACTG TCAAACTCGA GAACTACGTA CACAAATGGT TGGCCAGCTA
GCGCGAGCGG CAACTATATA TCACGTGGAT GAAATTATTG TTTTTGACGA CAAGCTTGCT
AAAGAAATGA AGCCAGATCG GGGTTACTAC CAACGAAGCA ACCATCATGG TGGGTCAGAC
GCTTCGCCTC GGTCTGGACA GAAAGACAAT CAAGTCGACA AGGATGAATC ATCTCAGTCA
AACCGTGACG AACCCAGTCG CACGCCATCA AGCCGGTCAG ATCCTCACGA ATTTATGGCA
CGCGTTTTTC AGTACTGTGA ATGTCCCCAA TACTTGCGCC GGGATTTCTT TCCCATGCAT
GGTGATTTGC AGTATGCTGG ACTCTTGGCA CCAATGGATG CGCCCCATCA TGTGCGAGTA
AATGACCGGG CGCGATTTCG GGAAGGCATT GTCTTGGAAA AAACCTCATC TACAAACGGG
AACTCTCTGG TGCACTGCGG TATTCGAGGT CGGCCCGTCG AGATTGATGT TAAGCTGACG
CCTGGCATTC GGTGTACTGT GCAGCTAGAT CCCAAGGCAT CGTACGAGAC TGGGGGCAAG
CCCAACAGTA TCATCCGCGG CGGCAAGGTA GTGTCGCCAT CGGCACCGCG GAAATTTGAT
GGCACCTACT GGGGTTACAC AACTCGACTG GCCTCGTCCA TTAAGGCTGT TTTTGACGAA
TGTCCTTTTG GAGTATATGA TTTAAAGGTT GGGACAAGTG AACGGGGGAG TACTTCGTTG
GACGACGGAA AGTTTCGATT GCCTTCCTAC CAGCACGCAC TAATTGTCTT TGGCGGAGTG
GCTGGTATTG AAGAATGCGT CGACGCGGAT GAGAGTCTCT CGCTGCCGGG GTCGCAAAGC
CGAAAGCTGT TTGATTTGTG GGTGAATATT TGCCCTTTTC AAGGATCACG AACCATTCGT
ACCGAAGAAG CAGTGTTGAT AGCATTGGCC AAACTCAGTC CCTTGCTGAG CACAGCGGTC
AGCCCACTC
|
|---|
| Protein sequence | MDAVPCRGKP RFSTVSIAIP GSVVSNCQTR ELRTQMVGQL ARAATIYHVD EIIVFDDKLA
KEMKPDRGYY QRSNHHGGRS DPHEFMARVF QYCECPQYLR RDFFPMHGDL QYAGLLAPMD
APHHVRVNDR ARFREGIVLE KTSSTNGNSL VHCGIRGRPV EIDVKLTPGI RCTVQLDPKA
SYETGGKPNS IIRGGKVVSP SAPRKFDGTY WGYTTRLASS IKAVFDECPF GVYDLKVGTS
ERGSTSLDDG KFRLPSYQHA LIVFGGVAGI EECVDADESL SLPGSQSRKL FDLWVNICPF
QGSRTIRTEE AVLIALAKLS PLLSTAVSPL
|
|---|
| |