Gene PHATRDRAFT_14002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_14002 
Symbol 
ID7202369 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011681 
Strand
Start bp187936 
End bp189201 
Gene Length1266 bp 
Protein Length398 aa 
Translation table 
GC content46% 
IMG OID 
Productbeta-mannosyltransferase 
Protein accessionXP_002181503 
Protein GI219122337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAATTCTGG GACAGCCCGT TCTATTTGAC TTTAGCGGTG TAACAGGCAA GATGCATGTT 
GTTGTAATCG TTCTAGGTGA TCTCGGAAGG TCGCCTCGCA TGCAATATCA TGCCCTTTCT
CTCCTACAAG CTGGGCATTT TGTTTCTCTT ATAGGCTACG AAGGTGAAGA CCTTATCCCA
GCGCTTTACG AGTTTTCCAA CGAGCAACTG GGTATCATCC GATTCAAAGT ACCTTCTCCG
AGATTGTTAC AGAAGGTCAT GCCAGTTTAT TTTGTCTGGC GGATATTCAG CTTAACAGTT
TGGTCGCTGT TTGCTTTGCT CTCAGTGCAC GCAAAGCGGA AGTACCCTAT AGACTGCATT
CTTGTGCAAA ATCCGCCTGC TCTTCCCTTG CTCTCTGTTG CCTATACTTT CTGCTGGATA
CTGCGCCTCC TCCAAGGAAA ACGCGCCTGT TTGATTATCG ACTGGCACAA TATCGGCTAT
TCCATGTTGA AGCCAGGTGG CTTCCAAATA CTCGCGCGAA CCTACGAACG AATAATGGCA
CCTCTTGCTG ATGGCCATTT TACCGTAACA AAGGCAATGA AAAATTTTCT ACACGCTACA
ATGAACATAC CGGACGATGC GAATATACGC GTACTATATG ACTGCCCTCC AGATATGTTT
CAACCAATAT CATTTGAACA GCAATACGAC ATTCTTTACG AGCTGGACAA AAAGTTTTGC
GAGGCGTGTC CACGATTTTG GTATGCCAGT AAAGACCCAG AATGTCAGTC TATGTTCATT
GAAAAATTGC CGAATGGAGA TTGCCGACCT CGGAAGGGAC GGCCTGCACT GATCACAAGC
TCAACAAGCT GGACAGCTGA CGAAGATTTT GGTATTCTGC TCGCTGCCTT GATTCTTCTA
GATGACCGGA TTAAAAGCGA AAAGTCTTCA TTGAAAGTGA TGGTTGCTGT GACCGGGAAA
GGACCTCAGA AAGCTGCGTA CGAGGAAAAA ATTTCGCAGC TCAGCCTTGA GTTTGTCGCG
ATTCAAACTT TGTGGTTAAA GCCAGAGAAC TATCCCAAGC TGATCGCATG CGCGGACTTT
GGAGTATCAC TTCATACTTC GACGTCTGGT CTAGATTTAC CAATGAAAAT TCTTGATCTC
TACGGATGCG AAGTTCCTGT TTGTGCAGCA GATTTCGAGT GCTTACCAGA GCTTGTTTTG
GATGACCGAA ACGGCCGCGT TTTTCGAAGT CATGAAGAGC TAGCTGACCA GTTTTGGGAA
TTATTG
 
Protein sequence
VILGQPVLFD FSGVTGKMHV VVIVLGDLGR SPRMQYHALS LLQAGHFVSL IGYEGEDLIP 
ALYEFSNEQL GIIRFKVPSP RLLQKVMPVY FVWRIFSLTV WSLFALLSVH AKRKYPIDCI
LVQNPPALPL LSVAYTFCWI LRLLQGKRAC LIIDWHNIGY SMLKPGGFQI LARTYERIMA
PLADGHFTVT KAMKNFLHAT MNIPDDANIR VLYDCPPDMF QPISFEQQYD ILYELDKKFC
EAYCRPRKGR PALITSSTSW TADEDFGILL AALILLDDRI KSEKSSLKVM VAVTGKGPQK
AAYEEKISQL SLEFVAIQTL WLKPENYPKL IACADFGVSL HTSTSGLDLP MKILDLYGCE
VPVCAADFEC LPELVLDDRN GRVFRSHEEL ADQFWELL