Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_14002 |
Symbol | |
ID | 7202369 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | + |
Start bp | 187936 |
End bp | 189201 |
Gene Length | 1266 bp |
Protein Length | 398 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | beta-mannosyltransferase |
Protein accession | XP_002181503 |
Protein GI | 219122337 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTAATTCTGG GACAGCCCGT TCTATTTGAC TTTAGCGGTG TAACAGGCAA GATGCATGTT GTTGTAATCG TTCTAGGTGA TCTCGGAAGG TCGCCTCGCA TGCAATATCA TGCCCTTTCT CTCCTACAAG CTGGGCATTT TGTTTCTCTT ATAGGCTACG AAGGTGAAGA CCTTATCCCA GCGCTTTACG AGTTTTCCAA CGAGCAACTG GGTATCATCC GATTCAAAGT ACCTTCTCCG AGATTGTTAC AGAAGGTCAT GCCAGTTTAT TTTGTCTGGC GGATATTCAG CTTAACAGTT TGGTCGCTGT TTGCTTTGCT CTCAGTGCAC GCAAAGCGGA AGTACCCTAT AGACTGCATT CTTGTGCAAA ATCCGCCTGC TCTTCCCTTG CTCTCTGTTG CCTATACTTT CTGCTGGATA CTGCGCCTCC TCCAAGGAAA ACGCGCCTGT TTGATTATCG ACTGGCACAA TATCGGCTAT TCCATGTTGA AGCCAGGTGG CTTCCAAATA CTCGCGCGAA CCTACGAACG AATAATGGCA CCTCTTGCTG ATGGCCATTT TACCGTAACA AAGGCAATGA AAAATTTTCT ACACGCTACA ATGAACATAC CGGACGATGC GAATATACGC GTACTATATG ACTGCCCTCC AGATATGTTT CAACCAATAT CATTTGAACA GCAATACGAC ATTCTTTACG AGCTGGACAA AAAGTTTTGC GAGGCGTGTC CACGATTTTG GTATGCCAGT AAAGACCCAG AATGTCAGTC TATGTTCATT GAAAAATTGC CGAATGGAGA TTGCCGACCT CGGAAGGGAC GGCCTGCACT GATCACAAGC TCAACAAGCT GGACAGCTGA CGAAGATTTT GGTATTCTGC TCGCTGCCTT GATTCTTCTA GATGACCGGA TTAAAAGCGA AAAGTCTTCA TTGAAAGTGA TGGTTGCTGT GACCGGGAAA GGACCTCAGA AAGCTGCGTA CGAGGAAAAA ATTTCGCAGC TCAGCCTTGA GTTTGTCGCG ATTCAAACTT TGTGGTTAAA GCCAGAGAAC TATCCCAAGC TGATCGCATG CGCGGACTTT GGAGTATCAC TTCATACTTC GACGTCTGGT CTAGATTTAC CAATGAAAAT TCTTGATCTC TACGGATGCG AAGTTCCTGT TTGTGCAGCA GATTTCGAGT GCTTACCAGA GCTTGTTTTG GATGACCGAA ACGGCCGCGT TTTTCGAAGT CATGAAGAGC TAGCTGACCA GTTTTGGGAA TTATTG
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Protein sequence | VILGQPVLFD FSGVTGKMHV VVIVLGDLGR SPRMQYHALS LLQAGHFVSL IGYEGEDLIP ALYEFSNEQL GIIRFKVPSP RLLQKVMPVY FVWRIFSLTV WSLFALLSVH AKRKYPIDCI LVQNPPALPL LSVAYTFCWI LRLLQGKRAC LIIDWHNIGY SMLKPGGFQI LARTYERIMA PLADGHFTVT KAMKNFLHAT MNIPDDANIR VLYDCPPDMF QPISFEQQYD ILYELDKKFC EAYCRPRKGR PALITSSTSW TADEDFGILL AALILLDDRI KSEKSSLKVM VAVTGKGPQK AAYEEKISQL SLEFVAIQTL WLKPENYPKL IACADFGVSL HTSTSGLDLP MKILDLYGCE VPVCAADFEC LPELVLDDRN GRVFRSHEEL ADQFWELL
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