Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13994 |
Symbol | |
ID | 7202556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011681 |
Strand | + |
Start bp | 594302 |
End bp | 595309 |
Gene Length | 1008 bp |
Protein Length | 336 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181591 |
Protein GI | 219122520 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.455794 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACGAG AAAAATCTCG CCTAAAAACC AAATCCAACG TATATCGCGC ACTGATGGGC AATGTTGTGA TATGTGCTGC AAAATTTGGA GCCTGGCTGA GTTCGGGAAG TAGTGGGATG TTAGCCGAAT TCATTCATTC CGTTGTTGAC TGCGGCAACC AGGCGTTACT CTTAATCGGG CTCCGCGATT CACGACTAGA CGCTGATCGC AAGCACCCTT ATGGCTACGG GAAAAGCGTT TACTTCTGGG CGCTTGTCTC CGCTTTAGGG ACATTCTTTT TAGGCGCCGG TGTCTCCATG ACACACGCTG TTGATAATCT TTTGAATCCT TCGTTGCACG ATATCCCTAT TGAGGTGTGG GGCGTCCTGG CGTTTTCGTT TGTTGTGGAT GGATATGTTC TGAGCAAAAC AATTTCCGAA ACCATGGCAA CAAGACCCGC TACCACATCC TATTACAAGC ACTTGGCGAA CATACGTGAC CCGGCCACAT TGGCAATTTT GTTGGAAGAT GGTGCTGCCT GTCTAGGTGT CGTGTTGGCC TTTGGGGGCA TCGCTGCTTC TCACTATACC GGAAACGCAA TTTTTGACGG AGTGGCTGGT GTTGGCATTT CGGCCCTGCT CGGTGTCATG GGGATTGCCT TGGTGAAAAT GAATCATCGA TTTTTACTGG GACAGGCGGT AGATCGCGAA ATCACCGAAG AAATCGGCAA GATTTTATTG AGCCGACGCA GCATCGATAG CATTCGGTCG GTACAGAGCC AATGGACTGG ACCCGAAACG TTTTCTTACA AGGCGGAAGT CGATTTTGAC GGTACCTATC TCGCCGCCCG GCTAATGCCT ATCTACCAAA AGGAGTTTGT AAAAATTCGG GACACAATGG ATACTGAACT GCAAGTCATG CTGGCTTTAT ACGCTGAAGA TGTTATGCGG ACGGTAGAGC GCGAAGTGCG ACATGTAGAA GCCAATATTC GAAAAAAATA CCCGGGTGCG GAGTATATCG AGCTTGAG
|
Protein sequence | MEREKSRLKT KSNVYRALMG NVVICAAKFG AWLSSGSSGM LAEFIHSVVD CGNQALLLIG LRDSRLDADR KHPYGYGKSV YFWALVSALG TFFLGAGVSM THAVDNLLNP SLHDIPIEVW GVLAFSFVVD GYVLSKTISE TMATRPATTS YYKHLANIRD PATLAILLED GAACLGVVLA FGGIAASHYT GNAIFDGVAG VGISALLGVM GIALVKMNHR FLLGQAVDRE ITEEIGKILL SRRSIDSIRS VQSQWTGPET FSYKAEVDFD GTYLAARLMP IYQKEFVKIR DTMDTELQVM LALYAEDVMR TVEREVRHVE ANIRKKYPGA EYIELE
|
| |