| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47224 |
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| Symbol | |
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| ID | 7202203 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | - |
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| Start bp | 857541 |
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| End bp | 859018 |
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| Gene Length | 1478 bp |
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| Protein Length | 463 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002181457 |
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| Protein GI | 219122238 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000362966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCCATGACG AGAAATGGAA GAATCAAAAA TGCATCAGCC ACTCTGGCGA TTTTGGTTGC
TTTTGTGATT CTACAGCTAC AGAAGGACCG AGATATGAAA TTTCGAACAT CCTCACCACC
GAATGAACAA CGCATGCACC ACAGGAATGC TACTCACTTG GCGCCCACAA CGAACAGTGT
TATCCCTAGA CGTAACGGGA CGCTATGTGA TGATCTTCAT CCTTTACAAG CTTTAGAGCG
TTACAAAGCT CAACACTCGC AAGCAATCAT GCTAAGTGAA TCCCCTGCTG ATGCCGTCCA
TCGCAGGTAT GCCATTGGCT ACTACTCCTG TCCTTTCCAA GCCGGCAACC GCTTACATCA
TTTCTTCAAT GCCATGATTT GGGCCATAGT TACCAATCGC ACTCTCTTGT GGAAGTACTA
CGATGCTAAA ACGTGTCGTC TTGTGTCACA GAGAAGAAGC CAGCCACATC ACGACAGACA
AATTTGCCTA GTCGCCAACA CCGAAGCAGA ATGCGAAGTG GTGCTTCATC GAAAGGCATC
TTGGATTCCT TCGCTGGAAG AATGGGCGCC TAAGCAGCTG GGGAGTAACA CCACTTTAAC
GTCACTTTCG TATTGGAGTA CTCATCGTCC TCCATCCGAC CCGACTCGTT CCAAGGTTCG
TTGGCGGGAT ATTGATTCGA AACACCAAGG TGTGGACCTT TGGACTGAAT TTCAGATTGT
TGACTTTCCA CAAATGTTAG GGAAGGATGC GGGAAATGTT TTAGGAGACG AAAAAGGACG
CCTCGACATG TTGGCGACCG ATTCAGCGCG GGATGCAGCG CGGAACTTGT TTGCTGAAGG
CTCACATTTC ACTTACGGTA TGGTACGATC ATTCACGATT GTGTGATTGC CTTGAACATA
TTACTGTCCA ATACTCACTG AAAGACCCCT TAAACACGAC AAAGCTTTTT CGAGAAGTAT
TTGACCTTCG ACCGAGCGTG CTTTCTTTAG ACAGCACGTC TGTGCTCGAC GCCGTCAGTT
TAAGTAATCC CTTTTCCATT GCCTTACATT CCCGACATTC CAAGCCTGAG GACAACGGTT
CTGACGTTTC TACAGAACTA AAGTGTTTGA CAAGTCTCAC TCTAAATCGT ACACAAGGAG
ATAAATGTGT CGTGTACCTC CTATCCGATC GGGTCAGAAC ACTCGAGCAA TTGACGAATC
ATGTGAACGA GAATCTGAAC TGTACAGCTG TTGTTGCAAA CCACGACGGT GGTCACCACA
TCAGGGGAGA ACACGGTCCT TTCGCGGGAG CTGACTTTTT CCGGGACCTC GACCTCGCCT
CTCGTGCACG AAACGGCTTC GCTGGTTCTA CCCGGAGCTC ATCGAGTCTA TTGCAAGAGT
GGATCGAGTA CGATCGTACG ATCGAGTCTT GCAGCCCCAG AACGAAAGGG GTCCTGCCGC
CCCTACCGAA ACTCAATACG TGTAAATTAC CAAAATAG
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| Protein sequence | MTRNGRIKNA SATLAILVAF VILQLQKDRD MKFRTSSPPN EQRMHHRNAT HLAPTTNSVI
PRRNGTLCDD LHPLQALERY KAQHSQAIML SESPADAVHR RYAIGYYSCP FQAGNRLHHF
FNAMIWAIVT NRTLLWKYYD AKTCRLVSQR RSQPHHDRQI CLVANTEAEC EVVLHRKASW
IPSLEEWAPK QLGSNTTLTS LSYWSTHRPP SDPTRSKVRW RDIDSKHQGV DLWTEFQIVD
FPQMLGKDAG NVLGDEKGRL DMLATDSARD AARNLFAEGS HFTYGMLFRE VFDLRPSVLS
LDSTSVLDAV SLSNPFSIAL HSRHSKPEDN GSDVSTELKC LTSLTLNRTQ GDKCVVYLLS
DRVRTLEQLT NHVNENLNCT AVVANHDGGH HIRGEHGPFA GADFFRDLDL ASRARNGFAG
STRSSSSLLQ EWIEYDRTIE SCSPRTKGVL PPLPKLNTCK LPK
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