| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_47199 |
|---|
| Symbol | |
|---|
| ID | 7202188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011680 |
|---|
| Strand | + |
|---|
| Start bp | 791589 |
|---|
| End bp | 792680 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002181263 |
|---|
| Protein GI | 219121833 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTTTCCCAGA TTCAGCTCAC TCTCATCTTT AGATACCTTC CTGTCAAACA TCGAGTTGAT
ACTCGCTACC ATATTTATCG CCGCTGTAAA ACCAAACATT TCTGCTCCAA GAAAGCAAGA
ATGATTCACC GGATCCTCTC CGTCCCGAGA AGCATCGTAA AGTCAAGTCG CCTGTCAGTT
GCGAAACTTG GTACGCTACC GGTCTCATTC CCAAAAATTC GAACCTATTC GTCGACGGTA
CCGGCAAACG AATCGAAGCC TTATCTTTCG GGAAATTCGA CTCATTTTGG TTTCGAACAA
GTAGCCATCG ACCAAAAGGA AAGTCTCGTA CGTCAAGTAT TTGATAATGT CGCGGATTCT
TACGATGTCA TGAATGATCT CATGAGCGGT GGACTGCATC GATACTGGAA AGACTATTTG
CTGGAAGTAT CATCAGTGGA ATCCATGGCC TCGGCGGTTC GTCGCACCAA CGGGGACCTT
CGTATTCTCG ATGTCGCAGG CGGGACGGGA GACGTCGCTT TTCGCTTTGT AAACGCGGCA
GGATGCGTAG AACGGGCCAA ATCGTCCGGA GAAGACCCGG TTTCCGTCAC GGTCTGTGAT
ATTAATCACG AAATGTTGCG TGTTGGAGAT GTAAGAGCAC GAAAGCGCTT CGGCAATTCT
CTTTTGGATG ACAGCCGAGG CTTACGATTC ATGCAAGGGA ACGCCCAGGC GCTTGAGTTT
GAAGACAACT CTTTCGATTT ATATACGATT GCTTTTGGGC TACGTAACGT GACGGATGTG
GACATGGCGC TACGAGAGGC AAATCGTGTT CTCAAGCCGG GTGGACGATT CATTTGCCTC
GAATTTTCCC AGGTTCCCAA CGAGCTGCTT CGAACGATCT ATGATACTTA CTCCTTTCAC
GTGATACCCG CCATGGGTCA GATTGTAGCA CAAGATCGAG AATCGTATCA GTATTTGGTG
GAGAGCATTC GGAGATTTTC AAATCAGGAT GAGCTGGTGA CTCGGATGAA GAACGCTGGT
TTTCAGGTAT CTCGGTACAC CAATTTGACT GGTGGCATAG TTGCATTGCA CGAAGGCTGG
AAGAGCGTAT AG
|
|---|
| Protein sequence | MIHRILSVPR SIVKSSRLSV AKLGTLPVSF PKIRTYSSTV PANESKPYLS GNSTHFGFEQ
VAIDQKESLV RQVFDNVADS YDVMNDLMSG GLHRYWKDYL LEVSSVESMA SAVRRTNGDL
RILDVAGGTG DVAFRFVNAA GCVERAKSSG EDPVSVTVCD INHEMLRVGD VRARKRFGNS
LLDDSRGLRF MQGNAQALEF EDNSFDLYTI AFGLRNVTDV DMALREANRV LKPGGRFICL
EFSQVPNELL RTIYDTYSFH VIPAMGQIVA QDRESYQYLV ESIRRFSNQD ELVTRMKNAG
FQVSRYTNLT GGIVALHEGW KSV
|
|---|
| |