Gene PHATRDRAFT_47090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_47090 
Symbol 
ID7202008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp377643 
End bp378582 
Gene Length940 bp 
Protein Length303 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181366 
Protein GI219122048 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAGCAG GGTTCCGTAT CGTCTACCTC TGCCTGACTA CGACTACAGT AAATGGTCTG 
CGCTGGACAA CGCGAACGCA GCCTCCGATA GCCTTTGCTT TGTCCTCCTG CTTTCCTAAA
TCGTTTCGCT CTAATTTCCA CACTAGTGCA ACTCAAGCGC GTCTCATGAG TAGCAATGAC
AAGAATATCG ACACAGAAAG CGTTGGGAAG TCCGATATTG GCGCTGCCAC TCAGGACGCC
GACCCACCCG CCGATACGGC CATGAATCGT TCATGGAGAT CCTTGTTGGA GGTTTCCAGC
AACAAAAGTC GCAAAACACG AGGCTCCAAC TATGTGCAAC TGGCAACTTT TGATCCAGAA
GCAAATCAAC CCAAATGTCG AACAGTTGTT TTTCGTGGGT TTCAGAAACT CCCTCCTGAT
CACAAGTACG CTAGTGAACT GGACGGGAAA AGTTGTGTCA TGAAGATGAT AACCGACATT
CGGTCTCACA AGGTTAAGCA AGTCGAGGCT AGCGAAGATA GTGCCGCAGA AATGGTGTGG
TGGTTTTCTA AGACCAGTGA ACAGTACCGT GTTCAAGGAA AGCTCTTGTT CGTTGGTGGT
GGAAATTTTT TGGACGATGG GGATCGAGAA TTGGCCATTG CTCGAAAGGA AATATGGGGC
AACATGAGCG ATTCAGCACG TGAGGGCTTC TTTGACGAGC ATACACCAGG CGAGCCGTAC
TCGGGTGACA AAAAGACGGA TCTACCTTCG GGAGGGCGAG ACACGGACGG AAACTTGCTA
CCTCCACCCG ATAACTTCTT ATTGATGCTA TTAATCCCCA ATGAAGTCGA TTATTTGCGA
CTGACAGACA TGTATCGCCA GGCTGATAGG CTTGGAGAGG ATGGATGGTC TTTCGAACGA
GTCAATCCAT AGCATAACTT TAATCCAATA GCGCAGCCGA
 
Protein sequence
MVAGFRIVYL CLTTTTVNGL RWTTRTQPPI AFALSSCFPK SFRSNFHTSA TQARLMSSND 
KNIDTESVGK SDIGAATQDA DPPADTAMNR SWRSLLEVSS NKSRKTRGSN YVQLATFDPE
ANQPKCRTVV FRGFQKLPPD HKYASELDGK SCVMKMITDI RSHKVKQVEA SEDSAAEMVW
WFSKTSEQYR VQGKLLFVGG GNFLDDGDRE LAIARKEIWG NMSDSAREGF FDEHTPGEPY
SGDKKTDLPS GGRDTDGNLL PPPDNFLLML LIPNEVDYLR LTDMYRQADR LGEDGWSFER
VNP