Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_47090 |
Symbol | |
ID | 7202008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 377643 |
End bp | 378582 |
Gene Length | 940 bp |
Protein Length | 303 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181366 |
Protein GI | 219122048 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGCAG GGTTCCGTAT CGTCTACCTC TGCCTGACTA CGACTACAGT AAATGGTCTG CGCTGGACAA CGCGAACGCA GCCTCCGATA GCCTTTGCTT TGTCCTCCTG CTTTCCTAAA TCGTTTCGCT CTAATTTCCA CACTAGTGCA ACTCAAGCGC GTCTCATGAG TAGCAATGAC AAGAATATCG ACACAGAAAG CGTTGGGAAG TCCGATATTG GCGCTGCCAC TCAGGACGCC GACCCACCCG CCGATACGGC CATGAATCGT TCATGGAGAT CCTTGTTGGA GGTTTCCAGC AACAAAAGTC GCAAAACACG AGGCTCCAAC TATGTGCAAC TGGCAACTTT TGATCCAGAA GCAAATCAAC CCAAATGTCG AACAGTTGTT TTTCGTGGGT TTCAGAAACT CCCTCCTGAT CACAAGTACG CTAGTGAACT GGACGGGAAA AGTTGTGTCA TGAAGATGAT AACCGACATT CGGTCTCACA AGGTTAAGCA AGTCGAGGCT AGCGAAGATA GTGCCGCAGA AATGGTGTGG TGGTTTTCTA AGACCAGTGA ACAGTACCGT GTTCAAGGAA AGCTCTTGTT CGTTGGTGGT GGAAATTTTT TGGACGATGG GGATCGAGAA TTGGCCATTG CTCGAAAGGA AATATGGGGC AACATGAGCG ATTCAGCACG TGAGGGCTTC TTTGACGAGC ATACACCAGG CGAGCCGTAC TCGGGTGACA AAAAGACGGA TCTACCTTCG GGAGGGCGAG ACACGGACGG AAACTTGCTA CCTCCACCCG ATAACTTCTT ATTGATGCTA TTAATCCCCA ATGAAGTCGA TTATTTGCGA CTGACAGACA TGTATCGCCA GGCTGATAGG CTTGGAGAGG ATGGATGGTC TTTCGAACGA GTCAATCCAT AGCATAACTT TAATCCAATA GCGCAGCCGA
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Protein sequence | MVAGFRIVYL CLTTTTVNGL RWTTRTQPPI AFALSSCFPK SFRSNFHTSA TQARLMSSND KNIDTESVGK SDIGAATQDA DPPADTAMNR SWRSLLEVSS NKSRKTRGSN YVQLATFDPE ANQPKCRTVV FRGFQKLPPD HKYASELDGK SCVMKMITDI RSHKVKQVEA SEDSAAEMVW WFSKTSEQYR VQGKLLFVGG GNFLDDGDRE LAIARKEIWG NMSDSAREGF FDEHTPGEPY SGDKKTDLPS GGRDTDGNLL PPPDNFLLML LIPNEVDYLR LTDMYRQADR LGEDGWSFER VNP
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