Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37130 |
Symbol | |
ID | 7202257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | + |
Start bp | 229101 |
End bp | 230478 |
Gene Length | 1378 bp |
Protein Length | 459 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181161 |
Protein GI | 219121621 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGAA ATGCACCTAC GACACGACAC GGCTTCAGCA GTCAAAACCC ACAATCCAAC GAACAATTTT CAAACGTAGG GACCAGGGGG CCCATCCATC CGTCCATCTG CTCCTCCTGG TCTTTGGGAG GAACGCTTCC GGATCGAGCT TGGGTTAGGT CGCTCCTGGA AGTGAGCCTA CTTGCTGGTT TCTGTACACG AGTACGTGTT GCCTGCATGC CTTTGGCGAA GAAACGAAGG CGACACGCGG CGAACCTTTT CCTCATGACG TGCACCGCAG CAACGTGTTC CAGCACTTGG TTACTGGGAG CGTGGCGAGC TTCGGCTTTT CTGCAACCTG TCTATCGGAA ACCACAACAT ACCTGCAGCC CACTGCATCG TTTGGAACGA AGAGATCATT TTGCGTCGGC TGTTGTGAGC CGATTGCAGG CGTTTTTTGA ACAAGGACCG ACACCAAGGA AAGCACCAAA CTACACCACC AGCGGCATCA ATCACACTTC CGACAACGCT ACAGCTACCA TTCTGGCTTT AACACGTACA GAAATAAATC GAATGCGCAA ACGTGAGCTA AAAGAACAGT TGGAATTACG AAATTTGAAT ACCAGTGGCA CCAAAAAGGA CTTAATTCCT CGCTTACTTG ATGCGATCGA GGTAGACGAA ATCGTAAGAG AGCTACCGAT TATGAATAAC TCTGAAAACC AGAGTGAAAT AAAGTCCAGT GCGAGCCCCC CTTCACGAGA AGACCAGAAA TTTGCAGCGG CGTTGGAAGT GGTAGATCCG ACAGGAGGAT GTGTCGACTC GGAAAATAAG AGTGAAGAAA ATGTCAGTGC AAACCGCTCT TTGCAACAAG ACCAGCAACT TGCAGAGGTG CTGGAAGTGG TAGATCCGAC AGGAAATTAC ATATTACGCG TCAAAGGCGT GTCATGCTTG CAATCTTACG GTACGGGGAT TGGGATTGTC TTGGTCAACG CTAACGACGA TCGGGATGTG TGTACAGCTC GCAAAGTGTT GCAGGGCAAC CGCAGTGTAT TCGAAGCCGG ATACAGTGCC TTGATAGTCG GAATCCGCTT TGCATTGAAT CGGGGAGTTC GCAATCTCAC CGTGCAGATA GACCATGATG TCATTGTCAG CCAATTGACC GGGAAATTCC AAGTCAATCG AGAAAATCTC AAGCCCATGT ACTGGAATAT AATGCACCAT AAGGAAGAGT CATTCGACAC GTTCACTGTC GAACACATTT CGTTGGAAAT GAACACCGAA GCGACCGATC TGGCGGCGCG GGGTTTAGCA ACAGGAAAGT CAATCAACAT TGTAGACGTC TTTGATCCAA TGGGCGATCT TGGCACCGAG ACGCAAACGA AGGATTTCTT GAAGGCCA
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Protein sequence | MTRNAPTTRH GFSSQNPQSN EQFSNVGTRG PIHPSICSSW SLGGTLPDRA WVRSLLEVSL LAGFCTRVRV ACMPLAKKRR RHAANLFLMT CTAATCSSTW LLGAWRASAF LQPVYRKPQH TCSPLHRLER RDHFASAVVS RLQAFFEQGP TPRKAPNYTT SGINHTSDNA TATILALTRT EINRMRKREL KEQLELRNLN TSGTKKDLIP RLLDAIEVDE IVRELPIMNN SENQSEIKSS ASPPSREDQK FAAALEVVDP TGGCVDSENK SEENVSANRS LQQDQQLAEV LEVVDPTGNY ILRVKGVSCL QSYGTGIGIV LVNANDDRDV CTARKVLQGN RSVFEAGYSA LIVGIRFALN RGVRNLTVQI DHDVIVSQLT GKFQVNRENL KPMYWNIMHH KEESFDTFTV EHISLEMNTE ATDLAARGLA TGKSINIVDV FDPMGDLGTE TQTKDFLKA
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