Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_37105 |
Symbol | |
ID | 7202106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 167793 |
End bp | 169088 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181318 |
Protein GI | 219121948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGT CTAGAGAGGA CGCCACAAGA ATCTTTCCTT CCGCCAACTT ACCACCAACA GATTTATCGA TCGAAGCATT AATGGTGGAC ACTGACGGTC AAAATAGTGC CGAGAGAGAC TCCCACGCTA AGCAACAGGA GACATCTTGG ACCGACGAAT CGTATCCGAC ACCCAGATAT TCCTCGCAGG CGGAACAGCA TCCCCGAAAC GAGAATGCTT CCATTTTTCC TGATCTGACT ACGATGGACA TGCGTCAAAC AGTTGGAACC AGTACGGCCC ACCTTTCTGA TTGGATCAAC GATAACATTA TCGCCGTCCG GTACGGGGCG ATGGCAACGA TCGGGCTCTT GACCGCTTAC GGCCTTTCCC AAACACCGCT CTTTTTCCGT TATCGGTCGG TCGCCGAGCT TCCTAATTGG CTCTTTGCGA AACGGAGATC TATTACTTGT CGTCTTATGC CACAGTCGCA TCGGCAAATC TTACATCCCA ATCAACCCAT CCGGCTCTAT CTACGACACT TATCACCAGC GGAGCGAATC CTACTAGCGA TTTCCAAGTC AACCTATGAA AAGGTTCTTT CTTGGCATCC ATGGAATACT CTACCGCTAG AAACTTTGAG TGTTTCCTCC ACCGATCAAT CTGCACCAAC CGCCCGCCAA CTAGAAGCGT TAGAGGTTGA AATTGCCGGC ATTCAGGCTG CACCCGAGCA CCTGGCTCTC CGAGAAGCAC CGGGTGAATG GTTGGCACGG TTGTGCCGGG ACCGTACGAC AGTCTCACTC CAGCTGATTG CGCGACGTGT GATGGATCAA GGTGATGACA CCAATGAGCA ACGCTTAGGT ACAGCGAGTC GTATTGGCAT GCGCAAAAGC AAGCGTGATA TCCCCGAGCT GGATTTCTCA AGCTCAAAAA CTACCCAATC CCAAATTGCT ATTGGTCGCT TGTACTATCG TCCCAAACTA GCACAATTCC AGTCCACCGA CGTGGGCCTC TCTCTAGTCC GGTACGGTCG GGCAACACCC GTATCGGATG GTTTGTGGAA GACGCTTCTG GATTCGCACG TCGTCGTAGA AAGCAACAAA GATGAATCGG CACAGGAGGC GGCCAAACAA TCTTCGCGAG ATGCAACGTA CGCATCTCAG TTGAGCCAAG CCGAGTATGA AGCAGCCGCT GGTTCCTACG GTATGTGGAC TGACGCGGAG ATTCGTAAGA ATCGGGCAGA CATTGTCGAT GAAGCCGAGT TTCAAACAAC AGCTCCCGTT TGGAAAAAAG CCTGGCGGTG GATACGAAGA AGGTAG
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Protein sequence | MRLSREDATR IFPSANLPPT DLSIEALMVD TDGQNSAERD SHAKQQETSW TDESYPTPRY SSQAEQHPRN ENASIFPDLT TMDMRQTVGT STAHLSDWIN DNIIAVRYGA MATIGLLTAY GLSQTPLFFR YRSVAELPNW LFAKRRSITC RLMPQSHRQI LHPNQPIRLY LRHLSPAERI LLAISKSTYE KVLSWHPWNT LPLETLSVSS TDQSAPTARQ LEALEVEIAG IQAAPEHLAL REAPGEWLAR LCRDRTTVSL QLIARRVMDQ GDDTNEQRLG TASRIGMRKS KRDIPELDFS SSKTTQSQIA IGRLYYRPKL AQFQSTDVGL SLVRYGRATP VSDGLWKTLL DSHVVVESNK DESAQEAAKQ SSRDATYASQ LSQAEYEAAA GSYGMWTDAE IRKNRADIVD EAEFQTTAPV WKKAWRWIRR R
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