Gene PHATRDRAFT_37042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37042 
Symbol 
ID7202076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp27153 
End bp28121 
Gene Length969 bp 
Protein Length322 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181287 
Protein GI219121884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.117683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCTACG ATTTACTAAC GATACCACCT GAAATCAAGC AAAAGATAGC TACCTTCCTC 
TGCCCTCATG ATGCTGTACA GGTGGGGCTT ACATGCGTAG CACTTCGCCA AAGCCTATCG
CTTTCTTCAC TGGATCCGCC TCTCCTTTTG TTTGCGCGCA TGGATCGAGT CGGAGACTTT
GAGCATGGCG ATAACCCGGT CCGGGCATTC CGCTTCCCAA TTTTGAACAG AAGGGTCCAC
TCCCTCTCGC TCGGTCTTCG CTGGCGCGAC CAAGGTTGGG GAAACCGCAA AGGCCAAGTA
TTTGTTACGG CAATATCTGC CAGTACTGTT TCACAAAGAC GAGATGCCTT TGAGGATGGA
CGAATCGTTT TCGAATCAGA TATTGCACCT CATGAACAAT CGGCTTTGCG GATAAACTTT
GTGCCAATCG ACAGTGACAT ATACTATTTC TGGTACAAGG CAGGCGGAGG AGGCGGTCAC
AGCTTACACT TAAGCGATGG CAATCTTCGC ACTGTCATCT TTGACGACGA GCATCAAACT
ATTGCTCAAT CATATCGAAA TTTGACTCGA ATCGGTGTCA TTAATCCCGC GCTCCTCTTT
GAAAATGCAC CTCCAGCTCA GACCCAAACT TTTTTTCCAT GTCTACTTGT TCGCATATTC
CAGCTTCTCC GGCATCAGCT GGAACAAAAA CGAACTCCTG ACGAGGAATT GGTAACATAT
TTACAGGAGC ACGAAATTGC AGTGAATCAA AGAAGTTTGT CGGCTTTGGA AGGACTAGTA
CAGGCTGATA TCGAAGAACG GGAGATTCGA AGACATGAGG GAATGGATCA AGTGCGAAAT
CATGCTCATA TACCGACCAT CTTCGGCCTA GGGCGTATTC TGCTTGCGAA CCCTGAGTTC
CTCGTAGCCA ACGCACAGAA TCCTGACGTA CTCCAAGCCG CCAATCAAAT AGACGAAGGA
GAACACTAA
 
Protein sequence
MCYDLLTIPP EIKQKIATFL CPHDAVQVGL TCVALRQSLS LSSLDPPLLL FARMDRVGDF 
EHGDNPVRAF RFPILNRRVH SLSLGLRWRD QGWGNRKGQV FVTAISASTV SQRRDAFEDG
RIVFESDIAP HEQSALRINF VPIDSDIYYF WYKAGGGGGH SLHLSDGNLR TVIFDDEHQT
IAQSYRNLTR IGVINPALLF ENAPPAQTQT FFPCLLVRIF QLLRHQLEQK RTPDEELVTY
LQEHEIAVNQ RSLSALEGLV QADIEEREIR RHEGMDQVRN HAHIPTIFGL GRILLANPEF
LVANAQNPDV LQAANQIDEG EH