Gene PHATRDRAFT_37038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_37038 
Symbol 
ID7202073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp20667 
End bp21773 
Gene Length1107 bp 
Protein Length368 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181118 
Protein GI219121531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.313227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGCCC TTGCTGTTTC TGCTGCCCGA TCCATTCGAA AAGAAGTCGT AAATCCACGT 
TGGTGGAGTG GGGCCTACGA TGTGATTGAC ACTAGTCGTT TCATTATTGA TGGTAAAGGG
AAAGTCTGCA AGAGTGATCT ACTGCCTACT TCCTGGCTTG GACAAGAGAT TCAGGAGAAA
TATGACGACG TGGGTGTGCT TCATCTTCAG AATACTGGGC TTGTGGACAT GGCCGATCAG
CGGACACTAG CTCGAATCAT CATGGGGGAA GAAACCGAGT ATGAAGGTGG CGCAAACCCT
CGAGGAAGAG CCGAAGGCCT AGCGAACGTC TACGATATTG GTGCCCCTCT AATGGCAGAT
CTTCACTACC ATCATGAAAT GACGTACAAG TCCCATTCGG TTACAAGCTT AGGCTTCTTA
TGCAAGCACG CCGTAACGAC CAGACCAGGC GTTGGTTGGA GTTTTGTTTC GGATAGTGTC
CAGGCTCATG ACTATATCAT GCAAACAGAG CTGGGCCAGA AGCTGAAGGA GAAAGGCCTC
TGTTTCTTGA GGCGCATGAC AGATGCGGAG GACAAGCACA TGTTGGACCG AAACAAGCAA
GGCTCAGTTT ATAACCACTG GCAACAGTCT TGGATGACCA GTTGTCCTCA AGAAGCTGAG
GCTCGAGCTA ACGCACAGGG TTTGCAAGTG GAGTGGCTTG ACGATAAAGA AGATGGTCGA
ATTATGCAGA CCCGATACTA CAAGTCTGCT TTTGAGTATA TTTCGTTCCT CGACCGCAAT
ATCATGGTCA CTTCTATTGC TGATGATGGA GAATGGTTCG ATTCTTGGCC CGGAATTATG
GATATTCCCC AGGAAAAGCG TCCTCTGGAG ATGCTTTTTG GGGACAACGA ACCATTTACT
TTGGAAGAGA AACAGCTCTG GACAGATATC TATGGCATGT TTGGTATTCC AATCACCTGG
AAACCAGGAG ATGTCGCTGT GGTTTGCAAC ATGCGTTTTG CCCATGGTCG TCCAGGCATA
GAATTGCTCC CTGGCGAGAA GCGTGAGCTT GGAGTCATGC TCGGACCATT TTACGAGCGT
ATGGAGACTA GAGAGGACAA GTGGTAA
 
Protein sequence
MAALAVSAAR SIRKEVVNPR WWSGAYDVID TSRFIIDGKG KVCKSDLLPT SWLGQEIQEK 
YDDVGVLHLQ NTGLVDMADQ RTLARIIMGE ETEYEGGANP RGRAEGLANV YDIGAPLMAD
LHYHHEMTYK SHSVTSLGFL CKHAVTTRPG VGWSFVSDSV QAHDYIMQTE LGQKLKEKGL
CFLRRMTDAE DKHMLDRNKQ GSVYNHWQQS WMTSCPQEAE ARANAQGLQV EWLDDKEDGR
IMQTRYYKSA FEYISFLDRN IMVTSIADDG EWFDSWPGIM DIPQEKRPLE MLFGDNEPFT
LEEKQLWTDI YGMFGIPITW KPGDVAVVCN MRFAHGRPGI ELLPGEKREL GVMLGPFYER
METREDKW