Gene PHATRDRAFT_3251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_3251 
Symbol 
ID7202012 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp390178 
End bp391138 
Gene Length961 bp 
Protein Length294 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181370 
Protein GI219122056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTAGATGCCA AGTTTTTGTC GACGAAAGAA TTTCACATGT ACGAAACTTC CGGAATTCCT 
TGCGTCATTC GAAGTATACC AGATGGTTAC GATGGTGGAC GGTTTGCATC CGAGTGGGCG
GCGTCGCGCT ACTGGTCACT AGAAAAGTTG GCGGCAGACC CTGATTTGAG AGATCGATTC
TTCAAATGTG GAGAGGACGA TGACGGTAAG TCGGTCAAAG TCAAGTTGAA GCACTTTATT
AAGTACCTGC AGAGTAATGC GGACGACTCG CCCCTCTACA TTTTCGACAC ATCCTTTGAG
GAAGACCGTA AGGCGAAACG GGTTCTAGCG GACTACCGTG TTCCATCTTA TTTCAGTGAC
GACTTGTTCC AATTAGTGTC GGAGGCCCGG AGACCGCCGT ACCGTTGGTT TCTAGTCGGC
CCCGAACGCA GCGGAAGTAC CGTTCACGTC GATCCTTTGG CCACTAGTGC TTGGAATACT
CTGATGTTCG GGAAAAAGCG CTGGGTACTC TTTCCTCCGC AAGTGCCGAA GCAAGTAGTT
AAGGGAAGGG GGCTGGTACG CAGGGATGAG GATGACGAAG CCATTCACTA TTTCATGTTC
ATTTTGCCAA GGATCAAACG CAAGGCTGCG TCTTTGAAAC ATCACGAAGA CTATAAGGAC
TTTGCCTGCT ACGAATTTAC ACAGAATGCG GGAGGTACGT ACGTGCGGAA GTGAGGGGGG
CATTTTGAGG GTATGGACGT ATGTACATAA TTCGCTCATC TTTTCACGTA TAGAAACTTG
CTTCATTCCA CATGGCTGGT GGCATGCAGT GCTGAACCTT ACGCACACAG TCGGAGTAAC
ACAAAATTTT TGCTCTGAAC GTAACTTCGA TCAGGTTTGG CTGAAGACGC GGTCGGGACG
GAAGCATATG GCGTGGAAGT GGTTACAGCA GCTTGACCTT AAATATCCAC ATTTGGCCGA
A
 
Protein sequence
LDAKFLSTKE FHMYETSGIP CVIRSIPDGY DGGRFASEWA ASRYWSLEKL AADPDLRDRF 
FKCGEDDDGK SVKVKLKHFI KYLQSNADDS PLYIFDTSFE EDRKAKRVLA DYRVPSYFSD
DLFQLVSEAR RPPYRWFLVG PERSGSTVHV DPLATSAWNT LMFGKKRWVL FPPQVPKQVV
KGRGLVRRDE DDEAIHYFMF ILPRIKRKAA SLKHHEDYKD FACYEFTQNA GETCFIPHGW
WHAVLNLTHT VGVTQNFCSE RNFDQVWLKT RSGRKHMAWK WLQQLDLKYP HLAE