Gene PHATRDRAFT_28551 details

Gene Information

• Locus tag: PHATRDRAFT_28551
• Symbol: NURF-140
• ID: 7201969
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 774580
• End bp: 778431
• Gene Length: 3852 bp
• Protein Length: 1023 aa
• GC content: 51%
• Product: imitation switch isoform 1, alias nucleosome remodeling factor 140 kDa subunit
• Protein accession: XP_002181260
• Protein GI: 219121827

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0148713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GATGAGGAGA TCGATTCCGA CGTTGAAATG GAGGGCATGG ATCTGGAGGA CGACGACGGC 
CAAGTCGACG AAGCGGGAGA CGACGAGGAA GCGACCGAAT CGGACAATGC ACCCGTTGAA 
AACGAAGAAG ACTTTGCGGC TTTGGCGACG GAAGAAGCTC AGGAGATGGA AGAAGCGCGT 
CGGGAACGTA CGGAACTCAT GGCAGCCGAG CAGAAAAAAG CCATGGGCAG CAATCCACAG 
CCCTTGACAG CGGCGGAGCG ATTGGAATAC ATTCTCGCAC AATCGGACGT CTTTGCGCAT 
TTTCTGGCCG GTACGTGAGA GGACAGTGGG AGGAAACGGG GAGGCCAGTC ACCCGCAACG 
ACACCGTACT CGCGTGTGCG TGTGTGTGTG TGTGTGTACT AACCATCCCA CACTACTCCT 
GACGAGTGTA GATTCGCTCA CTAAAAAAAA TCATTGTTCT TTCTTTTACC AACGACAGGA 
TCCGTCGCAG CGGGCAGCAA AAAAGGCAAA GGTTCGCGAG GCAAAAAGGG ACGCATGACC 
GAGGCCGAAG AGGACGCCCA GCTTCTCAAG TCGGCGCAGT CCAAGCGTCG GGTGATCCGG 
GTCGACCAGC AGCCCTCCAA CCTAGCCCCG CACTGTCGTA TGCACCCGTA TCAGCTAGAG 
GGACTCAACT GGCTCATTAA ATTGCACGAT CACGGGATCA ACGGAATACT GGCGGACGAG 
GTACGTCAAT CGTCGAAACT TCCAGGCGTC GGTCGTTCCC GTCGAAGCCT ACTACTCACT 
CCGATATCTC CCTTTTCGAG TATAGATGGG TCTTGGCAAA ACGCTCCAGA CTATTTCGCT 
TTTGGCCTAC CTTCGGGAAA GCCGCGGAGT GCGGGGGGCA CATATGGTCA TTGTCCCCAA 
ATCGGTCGTT GGCAATTGGA TTCGGGAGTT CAAAAAGTGG TGCCCCTCTA TCAAGGCCAT 
TCGGATGGGA GGAACCAAGG ACGAACGACA GAAATTTGTC ACGGAAGACT TGCCTTTGGA 
TCCCAACACT GGTAAACGAA AGTTTGATGT CCTCGTCACC TCGTACGAAG GTTTGCTCCG 
GGAAAAGGGC AAACTCTCCA GGATTCCGTG GAAATACGTC ATGTAAGTAC GACCGCAGCG 
CGGCACCCAC GGTGCTAATA GGGCGGTCCA AAACTCTTTA TTTCACGTTG TGGTACGCTC 
ACGCAGTCCT GTCTTCTTTC CTCACAGCAT TGACGAGGCG CACCGTATCA AGAATGAGAA 
TTCGTCGCTT AGCAAGGTCG TCCGGACCAT GAAGACCGAA TTTCGCTTGC TCATTACGGG 
AACTCCTTTG CAGGTACGTT CGTGTGTTTG AGTGTGTGTG TGTGTGTGTT TGCGTGTAAA 
AGTCGAAGCG TCACCACGCG TGCGCTTATA GTGACGAACA GGAGGACCGT CACTAACATT 
TGTACCCTAT TTGATTCACA GAATAATCTG CGTGAGCTAT GGGCGCTTCT CAACTTTTTA 
ATGCCCGATA TCTTTGGAGA CGCTGAGCAA TTCGACGAAT GGTTCAGTTT AACGGACGCG 
TCGGGCAAGG AAAACGTAAT CAAGAAGCTC CATACCATTT TGCGACCGTT CATGCTTCGG 
CGCGTCAAAA AGGACGTCGC CACTTCGCTC CCGCCCAAGA AGGAAACGAA ACTCTACATC 
GGGTTGACAA AAATGCAACA GGAATGGTAC GTTCGTTGTC TCCAGAAAGA TGCGCACGAA 
CTAAACAAAC TTGGTGGTCC GGATCGCAAT CGCCTTTTGA ACGTTCTGAT GCAGTTGCGA 
AAGGTCTGCA ATCATCCGTA CCTATTTGAC GGAGCCGAAC AGGGCCCACC CTATATTGAC 
GGGCCTCATC TCTGGGAAAA TAGTGGCAAG ATGCAACTTA TGCACAAGCT ATTGCCCAAG 
CTCCAAGCGA AAGGATCTCG CGTTCTCATC TTTTGTCAAA TGACCCGCGT TCTTGATATA 
CTCGAGGACT ACTTTCGATT GACAAAATTG GAATACTGTC GCATCGACGG TAACACGGAC 
GGTGAGCGTC GGGATTCTCA AATGGACGAG TTCAACGCCG AAGGCTCAAG CAAATTTGCC 
TTTCTTTTGA GTACTCGTGC GGGGGGTCTC GGTATCAATT TGGCGACCGC CGACATTGTT 
ATTCTCTACG ATTCCGATTG GAACCCCCAA GTGGATCTCC AAGCAATGGA TCGTGCCCAC 
CGCATAGGAC AAACCAAACC GGTACAGGTC TTCCGGTTCG TGACGGAGGG TACCGTGGAA 
GAAAAAATCA TTGAGCGCGC CGACCGCAAG CTATTCCTCG ATGCCGCAGT TATTCAGCAA 
GGGAGATTGG CCGAGCAGCA TTCGTCGTTG GAAAAGGGCG ATCTCATGAA GATGGTACGG 
TTCGGTGCCG ATCAAATTCT CAGTGGAACA GGGGGGACCT ACACTGACGA AGATATTGAC 
GCTTTGATTG CTCGTGGAGA AGAGCGTACC ACCGAAATGC AAGCCAAATT GCAGACTGAC 
GCCCAACACA ATTTGGCCAA CTTCAGCTTG ATGGCCGAGG ACGAGGGTGG GACCGACACA 
TTCTCTTTTG GAGGAAAGAA TTATCGCGAT TCGGAAAAGT CGGCCGGAAA TTTTATCAAC 
TTGCCACAGC GACAAAGGAA GCGCAACTAC GATCTGAGCG GCTCTACGGG CAATACTGGC 
TTGTCAGGCA GCATGAAAGC GCACGCCGCT GATGCGGCAG CCAAGAAGAA ACGCAAGGGA 
CCAGCGTTAC ATGACTACCA ATTGTTTAAC ATGTCACGAC TTCATGCATT GATCGAAAAA 
GAGCGCGCTC TGGCGTCTGC GAAAGAGCAG GAGGTAAAGC TTATTGGCGA GTTGCGTCAA 
CGTGCGATTG AAGCTCCTCC GTTGGGAAGT GGTCACGCTC CGGGGTACAG TCGCGAAGAG 
CTTTTGCAAC TGGCTCATGC GAAAGAGCAA GGTCTTGATA CAAGCTTTGT TTTGTCCTCG 
AAAGAAGAAG CCGAACGAAG GAGCCTCTTG GCGGAAGGAT TTCCGGATTG GAGCCGAAAG 
GACTTTCGCT CCTTCTGTTT GAGCTTGGAA CGCCACGGAC GGTACGATTT CAATAGTATT 
GCGCAGGACG TTTTGCGTGA AACGGATAAA GATTTGCAGG AAGTCCAACG CTATTTTGTG 
GCCTTTTTTA CAAACTACAC GCGAATCAAT GACTGGCAAA AGATTCTTGA CAAGATTGAA 
CGCGGGGAAA AGAAGATTCT GCGACTGCGA CAAATCCGTG ACGCTATTCA GGAGAAGGTG 
GAGCGCCATT TGGAAGACGC GTTTGGTCCA CACTACGGAG AGAACGCTAA AAACGGAGAC 
GAATCCCAAA AGTTGCCGCC TGTATCTGAA TTGCTGCACT ACTCGTGGCC CCAGATGAGG 
ATAAGCTACG GTTCTAGTGG CCGAGGTCGG GGATATCAGG AAGAGGAAGA TGCCTTTCTT 
GTTTGCATGA TGTACCGGCA TGGCTATGGA GCGGCAGAAC GCATTCGTAT GGAAATCCGC 
CGCGCTTGGC AATTTCGATT CGACTGGTAC TTTAAATCTC GTTCGGCGCA AGAAATCCAG 
AAGCGATGTG ACATGTTGGT GCGCGTCGTG GAACGCGACA ACGCTGAAGT GCGAGAAAAA 
GAAGCAGAAG AAGAACGTAA GCAAGAACGG GACAGCTTTA CCGTCCCCAC TCCACAATCG 
GCAAAGGATA GTTTCCAAAA GGTTCCTGAA GGAGCGGTTG CCCAGTTTGC GTCTAACTAA 
GCAAGTCTGG CGAGATCTCG AACCGACAAC AGAACGGTAA ATGACCAAAA GTTATCGAAT 
GAATGTATAC GT 

 

Protein sequence

MEGMDLEDDD GQVDEAGDDE EATESDNAPV ENEEDFAALA TEEAQEMEEA RRERTELMAA 
EQKKAMGSNP QPLTAAERLE YILAQSDVFA HFLAGSVAAG SKKGKGSRGK KGRMTEAEED 
AQLLKSAQSK RRVIRVDQQP SNLAPHCRMH PYQLEGLNWL IKLHDHGING ILADEMGLGK 
TLQTISLLAY LRESRGVRGA HMVIVPKSVV GNWIREFKKW CPSIKAIRMG GTKDERQKFV 
TEDLPLDPNT GKRKFDVLVT SYEGLLREKG KLSRIPWKYV IIDEAHRIKN ENSSLSKVVR 
TMKTEFRLLI TGTPLQNNLR ELWALLNFLM PDIFGDAEQF DEWFSLTDAS GKENVIKKLH 
TILRPFMLRR VKKDVATSLP PKKETKLYIG LTKMQQEWYV RCLQKDAHEL NKLGGPDRNR 
LLNVLMQLRK VCNHPYLFDG AEQGPPYIDG PHLWENSGKM QLMHKLLPKL QAKGSRVLIF 
CQMTRVLDIL EDYFRLTKLE YCRIDGNTDG ERRDSQMDEF NAEGSSKFAF LLSTRAGGLG 
INLATADIVI LYDSDWNPQV DLQAMDRAHR IGQTKPVQVF RFVTEGTVEE KIIERADRKL 
FLDAAVIQQG RLAEQHSSLE KGDLMKMVRF GADQILSGTG GTYTDEDIDA LIARGEERTT 
EMQAKLQTDA QHNLANFSLM AEDEGGTDTF SFGGKNYRDS EKSAGNFINL PQRQRKRNYD 
LSGSTGNTGL SGSMKAHAAD AAAKKKRKGP ALHDYQLFNM SRLHALIEKE RALAREELLQ 
LAHAKEQGLD TSFVLSSKEE AERRSLLAEG FPDWSRKDFR SFCLSLERHG RYDFNSIAQD 
VLRETDKDLQ EVQRYFVAFF TNYTRINDWQ KILDKIERGE KKILRLRQIR DAIQEKVERH 
LEDAISYGSS GRGRGYQEEE DAFLVCMMYR HGYGAAERIR MEIRRAWQFR FDWYFKSRSA 
QEIQKRCDML VRVVERDNAE VREKEAEEER KQERDSFTVP TPQSAKDSFQ KVPEGAVAQF 
ASN