Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28445 |
Symbol | H2A-m1 |
ID | 7202130 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 287091 |
End bp | 287995 |
Gene Length | 905 bp |
Protein Length | 138 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | histone H2A isoform 1 |
Protein accession | XP_002181345 |
Protein GI | 219122004 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.320484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CCAATCCGCA ACACCCCAAA TCACACCATG GTACGTGACC TTTTTCTTCT CGACACGCCT TATATGGAAT GTTAGGATAT CCATTGTGTG CGCTTAGTTT AGGAAAACAC GACGAGCTGA TCAATTTTAG AATCGGACGA GTAGAAGAGG TATTACGTCG GTTTGAAGTT TTCATCGGAT CGCGCGACAT TGGCAGCGTT CCGATCACCA AGCCAATGGT GTTTTCGCTT TGTATCTTGT CTGCGGACCC AAGTCTGACC GATTCTTTTC CTGTATTACT GATAGTCAGG AAAAGGTGGC AAAGGAGGAA AAGGTGGCAA GGGCGGCAAG GCCCCGACCT CCAAGAAGGC ACCGCAGTCC CGTTCCAGCA AGGCCGGACT CCAGTTCCCC GTAGGTCGTG TCCACCGTTT TCTCAAGAAC TCGGTGCACC AGGGTCATCG CGTCGGTGCC ACCGCAGCCG TTTACACCTC CGCCATTCTC GAGTACCTCA CAGCCGAAGT TTTGGAACTC GCCGGGAACG CCTGCAAGGA TCTCAAGGTG AAGCGTATCA CACCCCGGCA TTTGCAATTG GCCATTCGCG GTGACGAGGA ATTGGACGCG CTCATCAAGG CCACAATTGC GGGAGGTGGT GTGATTCCCC ACATTCACAA GTCTTTGATC AACAAGTCCC AGGGAAAGGG CAAGAAAGCC AAGTTCTAAA ATATCTCACA ACAAAGGCCA GAGGGAAACG TACACCGTTT TTGTTGTCGT GTGTGTTTTG ACAACCAGTG TTCTGTGACG CGATGGGAGC GTCTTTTTCT GTTTGTTTAC GAACTTGGCG TTTTGACGAA TTCACTGCAC TAGCCTATCC AAAAAGAAAG GGTAGAGTAG CGTAGCCGTA CATTTTCAGA ACGAAACAGA AACTT
|
Protein sequence | MSGKGGKGGK GGKGGKAPTS KKAPQSRSSK AGLQFPVGRV HRFLKNSVHQ GHRVGATAAV YTSAILEYLT AEVLELAGNA CKDLKVKRIT PRHLQLAIRG DEELDALIKA TIAGGGVIPH IHKSLINKSQ GKGKKAKF
|
| |