Gene PHATRDRAFT_28445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28445 
SymbolH2A-m1 
ID7202130 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp287091 
End bp287995 
Gene Length905 bp 
Protein Length138 aa 
Translation table 
GC content50% 
IMG OID 
Producthistone H2A isoform 1 
Protein accessionXP_002181345 
Protein GI219122004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.320484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCAATCCGCA ACACCCCAAA TCACACCATG GTACGTGACC TTTTTCTTCT CGACACGCCT 
TATATGGAAT GTTAGGATAT CCATTGTGTG CGCTTAGTTT AGGAAAACAC GACGAGCTGA
TCAATTTTAG AATCGGACGA GTAGAAGAGG TATTACGTCG GTTTGAAGTT TTCATCGGAT
CGCGCGACAT TGGCAGCGTT CCGATCACCA AGCCAATGGT GTTTTCGCTT TGTATCTTGT
CTGCGGACCC AAGTCTGACC GATTCTTTTC CTGTATTACT GATAGTCAGG AAAAGGTGGC
AAAGGAGGAA AAGGTGGCAA GGGCGGCAAG GCCCCGACCT CCAAGAAGGC ACCGCAGTCC
CGTTCCAGCA AGGCCGGACT CCAGTTCCCC GTAGGTCGTG TCCACCGTTT TCTCAAGAAC
TCGGTGCACC AGGGTCATCG CGTCGGTGCC ACCGCAGCCG TTTACACCTC CGCCATTCTC
GAGTACCTCA CAGCCGAAGT TTTGGAACTC GCCGGGAACG CCTGCAAGGA TCTCAAGGTG
AAGCGTATCA CACCCCGGCA TTTGCAATTG GCCATTCGCG GTGACGAGGA ATTGGACGCG
CTCATCAAGG CCACAATTGC GGGAGGTGGT GTGATTCCCC ACATTCACAA GTCTTTGATC
AACAAGTCCC AGGGAAAGGG CAAGAAAGCC AAGTTCTAAA ATATCTCACA ACAAAGGCCA
GAGGGAAACG TACACCGTTT TTGTTGTCGT GTGTGTTTTG ACAACCAGTG TTCTGTGACG
CGATGGGAGC GTCTTTTTCT GTTTGTTTAC GAACTTGGCG TTTTGACGAA TTCACTGCAC
TAGCCTATCC AAAAAGAAAG GGTAGAGTAG CGTAGCCGTA CATTTTCAGA ACGAAACAGA
AACTT
 
Protein sequence
MSGKGGKGGK GGKGGKAPTS KKAPQSRSSK AGLQFPVGRV HRFLKNSVHQ GHRVGATAAV 
YTSAILEYLT AEVLELAGNA CKDLKVKRIT PRHLQLAIRG DEELDALIKA TIAGGGVIPH
IHKSLINKSQ GKGKKAKF