Gene PHATRDRAFT_28359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_28359 
Symbol 
ID7202089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp94960 
End bp96014 
Gene Length1055 bp 
Protein Length229 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181297 
Protein GI219121904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.45008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCGCGAGA AGGTAAGAAG AGACTCAATC GGTTTGAGGA TGGAATGTTT CCCCGTCAAT 
GATAAAACTT TTGATTCCTA CGAGCTCATG CATGCCATGT ACGGATAGTA TGGGAGGGAA
AGGTGTTATC TGCCCTTTAC CATCCGATGC TTGCACACGG ACAGCGTTGG TTTACAGTTA
GTAACAGCGG TATACGGTAA ATGTTTTCTC ACGCTACCTT CGTTTCGTTA CGCAGAGAAA
GTTGAACACA CTTCTCGACC CATCGACACT CGGAAGAAGC CCCTCTAAAA ATTATTTTGG
AACGAAATGT CCAAACTTGA CTCTGTTCTT TTGGAAAAGG CTATCGGCGA CGTCCTCGCC
TTCTCTGCCG GAGATGAGGT CAGCTTCGGT GGCGAATCGA AGCAGGGAAA GAAGCGTAAC
TTCACTGAAA CGATCGAAGC CCAGATTACC TTGAAGAACT ATGATCCCGT TCGTGACAAG
CGTTTTTCTG GAACTTTCAG GCTCCCCACT GTCCCTCGTC CTCAGCTCAA ATGCTGCGTT
TTGGGAAATG CCGCTCATTG TGAACAGGCG GATCGTATCG GTGTTGACCA CATGTCTGTT
GAGGATTTGA AGAAGCTCAA CAAAAACAAG AAGCTAGTCA AGAAGCTCGC CAAGCGCTAC
GATTTCTTTC TAGCTTCCGA CAACATGATC CGTCAGATTC CTCGTCTTCT CGGCCCCGGA
TTGACCAAGG CAGGTAAATT CCCTACTCTC CTCTCTGGTT CCGACGATAT GCAGGAAAAG
ATTGACGAGC AAAAGGCTAC GATCAAATTC CAGATGAAGA AAGTTATGTG CTTGAACGTG
GCTGTCGGAA ATGTGGGCCA GGATCCGAAG GAAATTATCG TCAATACCCA GCTCGCTGCT
AACTTCCTCG CCTCGCTTCT CAAGAAACAG TGGCAGAACA TTGGACAGAT CTACATCAAG
TCTACCATGG GACCCCCAAT GCAGATTTAT TTCTAAATTT ATGGACTTTG TTTGTGTGAC
AAGGTTTCAA AGATCTAACC CAACTTCGGC CATTG
 
Protein sequence
MSKLDSVLLE KAIGDVLAFS AGDEVSFGGE SKQGKKRNFT ETIEAQITLK NYDPVRDKRF 
SGTFRLPTVP RPQLKCCVLG NAAHCEQADR IGVDHMSVED LKKLNKNKKL VKKLAKRYDF
FLASDNMIRQ IPRLLGPGLT KAGKFPTLLS GSDDMQEKID EQKATIKFQM KKVMCLNVAV
GNVGQDPKEI IVNTQLAANF LASLLKKQWQ NIGQIYIKST MGPPMQIYF