Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_28359 |
Symbol | |
ID | 7202089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 94960 |
End bp | 96014 |
Gene Length | 1055 bp |
Protein Length | 229 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181297 |
Protein GI | 219121904 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.45008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCGCGAGA AGGTAAGAAG AGACTCAATC GGTTTGAGGA TGGAATGTTT CCCCGTCAAT GATAAAACTT TTGATTCCTA CGAGCTCATG CATGCCATGT ACGGATAGTA TGGGAGGGAA AGGTGTTATC TGCCCTTTAC CATCCGATGC TTGCACACGG ACAGCGTTGG TTTACAGTTA GTAACAGCGG TATACGGTAA ATGTTTTCTC ACGCTACCTT CGTTTCGTTA CGCAGAGAAA GTTGAACACA CTTCTCGACC CATCGACACT CGGAAGAAGC CCCTCTAAAA ATTATTTTGG AACGAAATGT CCAAACTTGA CTCTGTTCTT TTGGAAAAGG CTATCGGCGA CGTCCTCGCC TTCTCTGCCG GAGATGAGGT CAGCTTCGGT GGCGAATCGA AGCAGGGAAA GAAGCGTAAC TTCACTGAAA CGATCGAAGC CCAGATTACC TTGAAGAACT ATGATCCCGT TCGTGACAAG CGTTTTTCTG GAACTTTCAG GCTCCCCACT GTCCCTCGTC CTCAGCTCAA ATGCTGCGTT TTGGGAAATG CCGCTCATTG TGAACAGGCG GATCGTATCG GTGTTGACCA CATGTCTGTT GAGGATTTGA AGAAGCTCAA CAAAAACAAG AAGCTAGTCA AGAAGCTCGC CAAGCGCTAC GATTTCTTTC TAGCTTCCGA CAACATGATC CGTCAGATTC CTCGTCTTCT CGGCCCCGGA TTGACCAAGG CAGGTAAATT CCCTACTCTC CTCTCTGGTT CCGACGATAT GCAGGAAAAG ATTGACGAGC AAAAGGCTAC GATCAAATTC CAGATGAAGA AAGTTATGTG CTTGAACGTG GCTGTCGGAA ATGTGGGCCA GGATCCGAAG GAAATTATCG TCAATACCCA GCTCGCTGCT AACTTCCTCG CCTCGCTTCT CAAGAAACAG TGGCAGAACA TTGGACAGAT CTACATCAAG TCTACCATGG GACCCCCAAT GCAGATTTAT TTCTAAATTT ATGGACTTTG TTTGTGTGAC AAGGTTTCAA AGATCTAACC CAACTTCGGC CATTG
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Protein sequence | MSKLDSVLLE KAIGDVLAFS AGDEVSFGGE SKQGKKRNFT ETIEAQITLK NYDPVRDKRF SGTFRLPTVP RPQLKCCVLG NAAHCEQADR IGVDHMSVED LKKLNKNKKL VKKLAKRYDF FLASDNMIRQ IPRLLGPGLT KAGKFPTLLS GSDDMQEKID EQKATIKFQM KKVMCLNVAV GNVGQDPKEI IVNTQLAANF LASLLKKQWQ NIGQIYIKST MGPPMQIYF
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