Gene PHATRDRAFT_21394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21394 
SymbolCSN4 
ID7202044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp587062 
End bp588359 
Gene Length1298 bp 
Protein Length405 aa 
Translation table 
GC content56% 
IMG OID 
ProductCOP9 SigNalosome subunit 4 
Protein accessionXP_002181404 
Protein GI219122127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.990038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGTCGGTCTA CTGCCTCGGG CCGTCCTTTC GAACGATCGA AACCCTTCAT CTCGTCATCC 
CCCTTCTCGC TAGTTCACCC ATGGAAGCCT TGGTGCGTAC CATCGATACG GCGATAGTCA
ATTGCGACTT TGTGACGCTA GCGAGCGTCT TTTCCGATCG TGGCACCACC GATTCCTGGC
ACGCCGTCGG GCAGGGCGAA CAACGTTCGG TGGCGGCCCA TTTTGTCCAA GCAGTCGTCG
CGAACGAAGC CTTTCTCGTC CAAGCCCTCT CCAATAGTAC TAACAGTATA AGTGTAGAAG
ACTTCATGAT TGCAGCCTTG AATCATTTAC CCGCGACGGT CGACCGAGCC GCCGACAATA
CACTAAGGCA GCGGCTCTTT GACGCCAAGA TCAATCGAGA CGACGTCGAC TACGTCGGCG
CCGCCCAAAT TCTGGCGGGC ATGCGGATGG ACGACGATCC GCAGTCGATC TACTACCTCA
CAGCCTCGGC ACGGACGGAT GTGTACGTCA AGATTGCCGA GTGTTTCCTC GCCGAAGACC
ACGTGGTGGA GGCGGACGCT GCCGTCACCA AGGCCGGCAC GGTGGCCGAG GCCATCCCGG
ACAAGGCGGC ACACACAGCA CTTCTCCTGC GCTACAAAAG TACGTACGTC CGAGTACTAG
ACGCCAACCG AAAATTCCTA GCTGCTGCCC AACGGTATCA CGAATTGAGT CAATCCGGGG
GGGATTTGAT CGACGCCGAC GACTTACTCC AGCTCCTCGG CCGGGCCGTT ACCTGCGCCA
TTCTCGCTCC CAACGGTCCG CAACGACAGC GCGTGCTCGC GCATATTGTG GAAGACCCCC
GTTTACCGCA ACTGGATCAA ATAGATGCCT TTGCCACGCA CCGGACGATT CTGCAAAAAA
TGTGCCGCCA CCAGATTCTC CCCCGCGCCC AACTCGAAAC CTTTGAAGCA TCCTTGGCGG
AACACCAAAA GGCCATCATG GGGGACGGTC TCACCATTAT GGAGCGGGGT GTTGTCGAGC
ACAACATGAT GGCCGTTTCG AAACTTTACC GCACTATTTA CATGGACAAG CTCGCGCACA
TTTTGGATTT ACCGGTACCC AAAGCCGAAG CCTTGGCCGC CAAAATGATC ACGGACGGAT
CCTTGAAAGC CTGCTTGGAC CAAGTAGAAG GATTACTGGA GTTTCAAACA CCCGAACCAC
CGACCCAACG CTGGGATCGA AATATTACCA GCCTGTGCGT TGAACTCAAT CAAGTGGCGG
AGGAAATCAC AGGTTTTCGA TCCCGACAAG GATTGTAG
 
Protein sequence
MEALVRTIDT AIVNCDFVTL ASVFSDRGTT DSWHAVGQGE QRSVAAHFVQ AVVANEAFLV 
QALSNSTNSI SVEDFMIAAL NHLPATVDRA ADNTLRQRLF DAKINRDDVD YVGAAQILAG
MRMDDDPQSI YYLTASARTD VYVKIAECFL AEDHVVEADA AVTKAGTVAE AIPDKAAHTA
LLLRYKSTYV RVLDANRKFL AAAQRYHELS QSGGDLIDAD DLLQLLGRAV TCAILAPNGP
QRQRVLAHIV EDPRLPQLDQ IDAFATHRTI LQKMCRHQIL PRAQLETFEA SLAEHQKAIM
GDGLTIMERG VVEHNMMAVS KLYRTIYMDK LAHILDLPVP KAEALAAKMI TDGSLKACLD
QVEGLLEFQT PEPPTQRWDR NITSLCVELN QVAEEITGFR SRQGL