Gene PHATRDRAFT_21388 details

Gene Information

• Locus tag: PHATRDRAFT_21388
• ID: 7202042
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011680
• Strand: +
• Start bp: 576403
• End bp: 583008
• Gene Length: 6606 bp
• Protein Length: 2189 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002181230
• Protein GI: 219121764

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0338841
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGAAC GTGAGGAACT CCAAAAGCGC TACGCGTACC ATGCCATGTC CAACAAAGTA 
GAACAGGCCG ATCGGTCGTC TCGACGGGTG CGGGGCAGCG AAGGCACTGG TGAGGTCGAA 
ACCTTACGCG GACGGCGGGA TATTGGACGC ATGGGCGATC GGGTGGAGGA GGGACAACCG 
CCCCCGCCGC CGACGAAAAA AGCCAAACAC GTACCTTCGG GACCCCCGTC CAGAAGGGTC 
GCTCACGGAA ACGAGACTAT TCTCGATTTG GGCAATCTCA CCGGTTATCA GCCAACGACG 
GAACAAGCCA AGGCGGCGTA CGAAAGTATT TTGACCATCA TTGGCTCCAA GGCGTTGTTG 
GGGAATCAGG GACCGCAAGT GTTGCGGGAC GCTGCCGAAG AAGTCCTCGC GACACTCAAG 
GATCCCAATC TACGGGATCC GGAACGTCAC GAGACAATAT CGGTCCTGCT CACGGGTAAG 
AGTCCGCGGT TATCCGGGGG ACTTTCCACC GAACACTTCA CGGCCTTGCT GCAGTACGGT 
AAACAATTGG ATGACTACAA TAAGGACCAA CAGCTGAAGG ATGATGACAA GGTGGACGAC 
GAAATGGGGG TCGCTGTGGT CTTCGACGAA TCCGAAGACG AAGCCAACAA ACATGACGAC 
AGTGAGATCG ATCAGAATGT GGTCGTTGAC ACATCATCGT CCTCTTCTGA AGACGAGGAG 
GAGGGCCCGG AAGCGGAGGA GGATTCCGAG GCGTTCCGAG ACGTGGACGA GGAGATCATA 
GTCCAGGGCG CCGATGACGT AGGGGCCAAG AAGCAGAGTC GTGCAGGCGA CCGCATATTG 
TCGGTACATG AGATTGACGC CCACTTTTTG CAGCGTCATT TGGCCAAGCA CGTTGACGAT 
GCGGACGAAT CGGCCAAGCT GGCGGCACAG GTTATGGGAA TTATCGATTT TCGTACCAAC 
TCGGACATGC GGGAGTGCGA AAATCGACTG CTCGTACTCC TCGGCTTTGA TCTTTTTGAT 
ACCATCAAGC TCATTCTCCG TAACCGTGTA CGAGTTTGGG CATGCATTTC CATGAAACGC 
GCACAGTCGG ACGAGGAACG TAAAGCAATC GAAGAAGCAC TGGCGAACGA ACCGACCGGT 
GAGGGGAAGT GTGTCTGGGA AGAGCTGCAT TCCAAGGGAA GAGCCGAAAA CTGGACGCGC 
GATCGTATGA AGGGCCTGGC GGATGCATTC AAGAGTGAAG CTACAGGGGA TCTTACCAAA 
GCAATCGACT CGGTGGGAGT CAAGCAAGAA GACGACGAGA CTGCAATGCA GGTCGAAGTA 
AAAGAAGAAG CAAACGAGTT GGATCTTGAC ATTCTAGCAT TCCCAGAGGG AAGCCACACA 
ATGACTAATA AGAAGTGCGA CCTTCCCGAT ACATCCTGGC GGGCCATGAA GAAAGGTTAC 
GAAGAAGTCC ATGTTCCTGC GGTCCGGAGT GTCATTCCCA AGGACGAGCG ACTTATTCGT 
ATCGACGAGC TTCCGTCTTG GACGCATGCC GCTTTTAAAG GAATGGAAAA GCTGAACCGG 
GTACAGTCCA AGTTGTGTGA CGTAGCGTTG CGTTCCTCGG AAAATTTGCT ACTGTGCGCC 
CCAACTGGTG CTGGAAAGAC CAATGTGGCG TGTTTGACCA TGATGAACAT CCTGGGCCAG 
TATCGTCGAG ACCGTCAAGT CGATGACGAC CCCGACGCGA AGGACTCGTT TGACTTGAGC 
TCTTTCAAGA TTGTGTACGT CGCACCCATG AAAGCGTTGG TGCAAGAAGT TGTCAAGAAT 
TTTTCCGAAA GGCTTGAGGA TTACGGAGTA ACGGTCAGAG AGCTTTCGGG TGATAGCAGT 
TTGTCGAGAC AGCAAATTTC TGAAACGCAG CTTCTAGTGA CTACACCTGA GAAGTGGGAC 
GTTGTTACGC GCCAAGGAGA AGGAAGAGCT TTTACGCAAC TCGTCAAGCT TGTCATTGTG 
GATGAGATTC ATCTTCTGCA CGACGAACGT GGACCAGTCC TTGAAAGCAT TGTAGCGCGA 
ATTATTCGCC AAGTGGAAAC TACATCCGAA CCTGTACGCC TTGTAGGCCT TTCGGCAACA 
CTTCCGAACT ATACCGACGT CGCTACTTTT CTTCGCGTAG ACCACAATAA AGGTCTCTTC 
TTTTTCGACC ATTCGTATCG GCCCGTTCCT CTACAAATGC AGTACATTGG ATTGACGGAG 
CGGAATGCAT TCCGGCGATT TCAGTTGCAG AACGAAATCT GCTATGAGAA GGCTATTGAG 
CAGAGACGCA ATGGAAATCA GATGCTGATT TTTGTTCACA GTCGCGCCGA GACTGGAAAA 
ACTGCCAAAG CGCTGCGGGA TCTTGCTCTG GAACGGGATG AGTCGACTAA TTTTGTCCGG 
GAGAAGGGGG CAACACAGGA GATTCTTCGA GAGGAGTCTT CGGCGGTGAA GAACGCCGAT 
CTTAAAGATG TTTTACCTTA CGGTTTTGCG ATTCATCATG CTGGAATGGC TCGCGAAGAC 
CGAGAGCTTG TGGAAGATCT TTTCGCGGAC CGTCACATTG CCGTATTGGT TTGTACCGCG 
ACTCTGGCTT GGGGAGTCAA CTTACCTGCG CATGCTGTCA TTATTAAAGG TACACAGATT 
TATGATCCGT CCAAGGGCCG CTGGGCCGAA CTAAGCCCAC TCGATGTGTT ACAAATGCTT 
GGCCGGGCAG GACGCCCCCA GTACGATAGC GAGGGCGAAG GAATTATTCT TACGCAACAT 
AGCGAATTAC AGTACTACTT GTCGCTCACA AACTTGCAGC TTCCGGTCGA AAGTCAGCTC 
ATCAAGACTC TTCCAGACCA CTTAAATGCT GAGATTGTGT TAGGAACGAT TCAGACCATC 
TCCGAAGCTG TCGATTGGCT AGGTTACACG TTTCTTTTCG TCCGTATGCT GCAGAATCCA 
AATCTCTACG GAATATCAGA GACCTCGTTT CTAGATGACC GCACTCTGAA GAAGCGGCGG 
CTTGATCTTG CCCACTCTGC CGCGTCGATT CTTGAGAAAA GTCATCTCGT TCGCTACGAC 
AGGAAAAGCG GCGCGTTGCA AGCAACCCCC TTGGGCCGCA TATCAAGCCA GTTTTACATT 
TCACACTCGT CTATGGCTGT GTACAGTCGA CACATGAGAT CTAATATGTC TGATATTGAG 
CTTCTTCGTT TGTTCTCGCT TAGTGGGGAG TTTCATCACA TAACTGTCAG AGAGGAGGAG 
AAATTGGAGC TCACTAAACT TTCCGGGCGT GTCCCAATTC CAGTAAAAGA AAGTCCAAAC 
GAAGCTTCGG CCAAAGTTAA TATTCTTCTG CAAGCCTACA TATCGCGGCT TAGACTCGAC 
GGCTTTGCCC TGGTCGCTGA TATGGCCTTC ATTCAGCAAT CAGCTGCACG TATCATGCGT 
GCGTTATTTG AAATTGCCCT TCGGAGGAAT TGGTCCTCTC TCGCTAAGCT TTGCCTTGAC 
ATGTCGAACA TGGTGTCGTA TCGGATTTGG AGAAGTCAGT CTCCTTTGAG ACAATTTAAG 
AACGTCCCGG AAGTTGTCGC GAGGAAGCTT GAGCGTAAAA GTGATATAGA ATGGGCGAGA 
TACAACGATC TGACCTCAGC CGATCTCGGG GAGCTCGTCG GCGTTCCTAA AATGGGCCGT 
GTTTTGCACA AACTTGTTCA GCAGTTTCCT CGTCTCGAAT TGTCGGCTCA GATTCAGCCA 
CTAACGAGAT CTATGTTACG CATTGAGGTG ACCCTACTGC CATCGTTTAA TTTCGATGTG 
ACGATACACG GATATGTGCA GCTTTTTCAT GTTATAGTCG AAGACGTCAA CGGCGATACA 
ATTCTGCATC ATGAGTTATT TTCGCTGAAG AGCAGCAATG CAGATGAGGA GCACGTTCTA 
CTGTTCTCAG TCCCAGTGCT AGAGCCGCTT CCGCCAGCAT ATTTTATTCG TGTAATGTCG 
GATAGGTGGC TTCATTCCAC AGCTGTGCTT CCTGTTTCCT TCAGCAAGAT GATCCTACCT 
TCAAAGTTTT CTCCTCCAAC CGAATTGTTG GATTTACAGC CTCTTTTACC ATCAGCTCTT 
GGAGTTTCTG CTTTGTCGGA GATTTTCGCT TACAAAGAGT TCAACCCAAT TCAAACCCAA 
GTATTTCATG AACTGTTTAA AACCGACAAG AATTGTCTAG TTTGTGCACC CTCTGGTGCG 
GGAAAGTCGA CTTGTGCTGT GTTCGCTGTT TTGCGTATGC TGACAACTAA CGCTGACGGT 
GTGTGTGTGT ACATTGCCCC AACTGACGCG ATCGCAGACC GAACGTTCAC GGAATGGAGG 
CTTCTTTTTG GTCGCATCCT TCCAAGCAGT TCTATTGTCC GACTGAGTGG GGAAACAGGT 
CCAGATCTGA AGCTCCTCTC TCAAGGAAAG GTTGTTGTAT CGTCGGCAAA GCAGTGGGAT 
ATGGTCAGTC GCCGCTGGAA GCAACGAAAA GCAGTGCAGA ATGTTGCCCT AATGATCTTC 
GATGAGCTGC ATTTTCTTGG AGGTATCATT GGACCGACGC TGGAAGTTGT AATATCTCGA 
ACTCGTTATA TGATCGGGCA GAGCGAAGAT GGCAAGACTG TCGCAAACAT GCGAATTGTT 
GGTCTCAGTG CCTCGCTTGC AAACGCTCGA GATGTGGGGG AATGGATGGG CGTGTCTGGA 
AAGAGTTTGT TTAATTTTTC TTCAAAGGCG AGGCCTATGC CACTCGAAAT CTTTTTTCAG 
TCCTTTGAAC AAGCGAATTA CTCAGCGAGG CTTATGGCGA TGGCCAAGCC TGTTTTCAGT 
GCCGTCGAGA GGCATATCGG GGAAGGAACG GCAATTGTGT TTACCCCGAG CCGTAGGCAG 
GCTCAACTTA CTGCGATTGA TCTTATGACA TTTCGAGATG GACAAGGGCT TGGGTCTTAC 
GTTGGCAAGT CTGTAGATAC GCTTACTCTC GCAGAAATCG CTTCAACACT GCGAGAGCCT 
GCCTTGCAAC AGGTTGTGAC GAACGGGATT GGCTTCCTTC ACGCAGGAAT GATAGATAGC 
GATTGGAATA CAGTAGTGGA TCTCTACAAC TCTGGGGCAT TGCGGATTCT GGTTTGTCCT 
ACAGACGTAT GCTGGAAGAT TCGTTGTGTG GGGCGACTGG TCATTATTAT GGGCACGGAA 
GTTTACGACG GTAGGGAGGG TCGACACCTT GACTACCCGG TCATGGACAT TCTTCACATG 
ATTGGACGTC ATGATCCAAG ATCGAGTGGT AAATGCGTTC TTCTATGTCA CGCCCCCAAA 
AAAGACTACC TAAAGAAGCT GATATACGAC CCAGTGCCGA TCGAAAGCCA TCTTGATTCA 
TACCTGCATG ATCCACTGAA TGCTGAAGTT GTAACTAAGA CAGTGTCGTC GATGCAGGAT 
GCAATCGATT ACTTGACCTG GTCTTTTCTC TATCGCCGTC TTCCTCAGAA CCCGACATAT 
TATGGACTGC GGGGTACTTC AAATGTTTTC CTTAGCGAAT ACTTGAGTGA GATGATTGAA 
ACAGTCATTG GCGATTTGGA AGAGAGCAAA TGCTGTAGCA TGTCGGAAGA AGGTGATATA 
TCTCCGTTAA ACTTGGGAAT GATCGCAGCA TACTACTATG TTCAGTACCG AACAATCGAG 
CTCATTGCCT CGTCCGTAAC GGAGAAAACA AAAATTCGGG GTATCATGGA AATTTTGTCG 
GCGGCTTGGG AATTCTCAGA GTTTCCTATT CGTTTCGGCG AAGACAGGAC GTTGAAATCT 
CTCGCACGAA CCCTGCCGTA TACGCCTCCA GACGGTGCGA ATTACGATGC AAACACGAAA 
GCCTTGATTC TTTTGCAATG TCACTTTAGT CGTAAGGTTA TTGGTGCTGA CCTGCGATCC 
GATCAGAAGA GCATGCTAAA GGAGGCCGTC AATCTCGTAC AGTCCATAGT AGATGTAATC 
AGCAGCAACG GATGGCTAAA GCCTGCGCTC GCCGCCATGG AGTTAAGTCA GATGCTCGTG 
CAAGGACTTT GGAATAAAGA TCATGTCTTG AAGCAAGTGC CCCACTTCAC GGAAGAAATC 
ATAGGACGTT GCCGAAATCA CGACGAACCT GTTGAAACAG TGTTCGATAT TTTGACGATA 
GAAGACGACG TCCGTAATCA GCTTTTACAG CTCCCCGATG ACAAGATGGC TGACGTTGCG 
GTATTTTGCA ATACATACCC AAGTATCGAG GTCTCATTCA AAGTACATGA TGTCGAAGAC 
GTTGCCGCAG GCAATCCGGT ACAAATCGTG GTCGAATTAG AGCGCGAAGT TGACGAAGAT 
GACATGGACG AAGCCGAAAT GGAGGCGCTT GGAACAGTTG CGGCACCACT GTTTCCGATT 
GCAAAGAAGG AAGGATGGTG GGTTGTTGTT GGGGATACAT CCACCAACTC ATTGCTATCC 
CTGAAACGTG TCAACTTGCG ACACAAGCAA AAATTGTCTC TAGATTTTCT CGCCCCAGAT 
GAACCAGGCG ATTACGACTT GACCCTGTTT TGCATGAGCG ACAGTTACCT TGGATGTGAC 
CAAGAGTACA GGATTCCCTT GAGTGTTGCG GCTGCAGAGT CTGACGAAAG TGAGGAGGAC 
GAGTGA 

 

Protein sequence

MAEREELQKR YAYHAMSNKV EQADRSSRRV RGSEGTGEVE TLRGRRDIGR MGDRVEEGQP 
PPPPTKKAKH VPSGPPSRRV AHGNETILDL GNLTGYQPTT EQAKAAYESI LTIIGSKALL 
GNQGPQVLRD AAEEVLATLK DPNLRDPERH ETISVLLTGK SPRLSGGLST EHFTALLQYG 
KQLDDYNKDQ QLKDDDKVDD EMGVAVVFDE SEDEANKHDD SEIDQNVVEG PEAEEDSEAF 
RDVDEEIIVQ GADDVGAKKQ SRAGDRILSV HEIDAHFLQR HLAKHVDDAD ESAKLAAQVM 
GIIDFRTNSD MRECENRLLV LLGFDLFDTI KLILRNRVRV WACISMKRAQ SDEERKAIEE 
ALANEPTGEG KCVWEELHSK GRAENWTRDR MKGLADAFKS EATGDLTKAI DSVGVKQEDD 
ETAMQVEVKE EANELDLDIL AFPEGSHTMT NKKCDLPDTS WRAMKKGYEE VHVPAVRSVI 
PKDERLIRID ELPSWTHAAF KGMEKLNRVQ SKLCDVALRS SENLLLCAPT GAGKTNVACL 
TMMNILGQYR RDRQVDDDPD AKDSFDLSSF KIVYVAPMKA LVQEVVKNFS ERLEDYGVTV 
RELSGDSSLS RQQISETQLL VTTPEKWDVV TRQGEGRAFT QLVKLVIVDE IHLLHDERGP 
VLESIVARII RQVETTSEPV RLVGLSATLP NYTDVATFLR VDHNKGLFFF DHSYRPVPLQ 
MQYIGLTERN AFRRFQLQNE ICYEKAIEQR RNGNQMLIFV HSRAETGKTA KALRDLALER 
DESTNFVREK GATQEILREE SSAVKNADLK DVLPYGFAIH HAGMAREDRE LVEDLFADRH 
IAVLVCTATL AWGVNLPAHA VIIKGTQIYD PSKGRWAELS PLDVLQMLGR AGRPQYDSEG 
EGIILTQHSE LQYYLSLTNL QLPVESQLIK TLPDHLNAEI VLGTIQTISE AVDWLGYTFL 
FVRMLQNPNL YGISETSFLD DRTLKKRRLD LAHSAASILE KSHLVRYDRK SGALQATPLG 
RISSQFYISH SSMAVYSRHM RSNMSDIELL RLFSLSGEFH HITVREEEKL ELTKLSGRVP 
IPVKESPNEA SAKVNILLQA YISRLRLDGF ALVADMAFIQ QSAARIMRAL FEIALRRNWS 
SLAKLCLDMS NMVSYRIWRS QSPLRQFKNV PEVVARKLER KSDIEWARYN DLTSADLGEL 
VGVPKMGRVL HKLVQQFPRL ELSAQIQPLT RSMLRIEVTL LPSFNFDVTI HGYVQLFHVI 
VEDVNGDTIL HHELFSLKSS NADEEHVLLF SVPVLEPLPP AYFIRVMSDR WLHSTAVLPV 
SFSKMILPSK FSPPTELLDL QPLLPSALGV SALSEIFAYK EFNPIQTQVF HELFKTDKNC 
LVCAPSGAGK STCAVFAVLR MLTTNADGVC VYIAPTDAIA DRTFTEWRLL FGRILPSSSI 
VRLSGETGPD LKLLSQGKVV VSSAKQWDMV SRRWKQRKAV QNVALMIFDE LHFLGGIIGP 
TLEVVISRTR YMIGQSEDGK TVANMRIVGL SASLANARDV GEWMGVSGKS LFNFSSKARP 
MPLEIFFQSF EQANYSARLM AMAKPVFSAV ERHIGEGTAI VFTPSRRQAQ LTAIDLMTFR 
DGQGLGSYVG KSVDTLTLAE IASTLREPAL QQVVTNGIGF LHAGMIDSDW NTVVDLYNSG 
ALRILVCPTD VCWKIRCVGR LVIIMGTEVY DGREGRHLDY PVMDILHMIG RHDPRSSGKC 
VLLCHAPKKD YLKKLIYDPV PIESHLDSYL HDPLNAEVVT KTVSSMQDAI DYLTWSFLYR 
RLPQNPTYYG LRGTSNVFLS EYLSEMIETV IGDLEESKCC SMSEEGDISP LNLGMIAAYY 
YVQYRTIELI ASSVTEKTKI RGIMEILSAA WEFSEFPIRF GEDRTLKSLA RTLPYTPPDG 
ANYDANTKAL ILLQCHFSRK VIGADLRSDQ KSMLKEAVNL VQSIVDVISS NGWLKPALAA 
MELSQMLVQG LWNKDHVLKQ VPHFTEEIIG RCRNHDEPVE TVFDILTIED DVRNQLLQLP 
DDKMADVAVF CNTYPSIEVS FKVHDVEDVA AGNPVQIVVE LEREVDEDDM DEAEMEALGT 
VAAPLFPIAK KEGWWVVVGD TSTNSLLSLK RVNLRHKQKL SLDFLAPDEP GDYDLTLFCM 
SDSYLGCDQE YRIPLSVAAA ESDESEEDE