Gene PHATRDRAFT_21275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_21275 
Symbol 
ID7202104 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp155431 
End bp156408 
Gene Length978 bp 
Protein Length239 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181149 
Protein GI219121596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0629377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACAGAG AAACTGAAGT TCTAAGAAGA CCGAAAGTAG TGTTGCGGAG AAGGGAAAAG 
GAGAGCTGCT CTAAGGAGCA ACTGAGATTA GACTTCGGAG ATTATAAGAT AGACGTTGTT
GAACGGGGAC AAAGCGTGAT CGGGCTCCAA GGTAGCATTT CGCTCCTACG GACACCAATC
ATGGGAGATA CCGTTAGCAC GCTCTTATTT CAGCCACCTG CGCCGTCCAA GCTGAAAGAG
CACAAGATCG TGTGGCTCAA CACATCGCGT GGTTCCCAGA TCCCTGCCTT TTTCATATCG
TACAAGACGC AGAGGGGCGC AGAGAGCTGT AGGAGTTTAT CCGCGGATGA ATTGAGAGAT
TCTCAACCAG AGAACGGAAT TACATTGCTA TATTCTCACG CGAACGCGGA GGATTTGGGG
TCTATATATC CATGGTGTAA ATTTCTGAGC AAAATGCTGC AAGTCAATAT ATTTGCGTAT
GACTATACCG GTTACGGAAT GTCGCACAAT CAAGGTTCGT GCACGTCTAT TGGAACTGTA
GTGACGCCTC GTTTTCAGTC GTTGTCTGAC CTGTCGACTC TTCGTTCATC TACAGGCCCT
CCTTCGGAAA AACACTGCTA CGCCGATATT GAGTCTGCAT ACGCCTTTTT ACGGAAAGAC
CTTAGAATCC CTGCGCAGAA TATTGTTCTG TACGGACGCT CGCTTGGATC AGGTCCTTCA
TGCCACTTAG CTGCACAAAC GGCTTTGCTA CACAAAGAGA ATGCTGAATA TGGCGCACAT
GATGGACCCG TCGGAGGCCT CATTCTGCAT GCCCCCTTTT TGTCTGTGTT CCGCGTTGTA
GCAGATACTG GATGCACTGT GTACGGAGAC AAGTTTCCGA ACATCGATGT TTTACCTATG
GTAAAAACAC CCACCATTCT CGTACACGGT ACCAGTGACC AAATTGTTCC TTTTCATCAT
TCGGAGCGGC TGTATGAC
 
Protein sequence
MGDTVSTLLF QPPAPSKLKE HKIVWLNTSR GSQIPAFFIS YKTQRGAESC RSLSADELRD 
SQPENGITLL YSHANAEDLG SIYPWCKFLS KMLQVNIFAY DYTGYGMSHN QGPPSEKHCY
ADIESAYAFL RKDLRIPAQN IVLYGRSLGS GPSCHLAAQT ALLHKENAEY GAHDGPVGGL
ILHAPFLSVF RVVADTGCTV YGDKFPNIDV LPMVKTPTIL VHGTSDQIVP FHHSERLYD