Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13725 |
Symbol | |
ID | 7202048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 611387 |
End bp | 612577 |
Gene Length | 1191 bp |
Protein Length | 397 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181409 |
Protein GI | 219122137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.829613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACGCTCTGA TACATACCCG CCGGACGCTA CACCAACGTC CCGAACTCAT GTATCAGGAA TCCCAAACCT CGGCCATTGT CCAGAAAGCC TTGACCGAAA TGGGTATTTC CAATTTCACC ACCGGCTGGG CCGTCAATAC GCATCCCGAT GTCATTCCCG GTCCGGGAGG CTACGGAATT GTGGTCGACA TTGGGACGGG ACAGGCTCCC TGCGTCCTCC TCCGTGCGGA CATGGACGCC TTGCCCATTC TCGAACAGAC CACGAACGTG GACGCCTTTC GATCGCAGAC AGACCACCAA ATGCATGCCT GCGGGCACGA CGGACACACC ACCATGTTAC TCGGTGCGGC GGCGATCCTC AAAGGCATGG AGGCGTCACT GCCTGGGACA GTCCGGATCA TGTTCCAGCC GGCCGAAGAA GGTGGAGCCG GGGCCAAGCG CATGCGGGAA GAAGGCGTTC TGAAGCAAGC TCCCCAGCCA TCTTACGCCT TTGGGATGCA CGTGTGGCCG ACTTTGCCTT CGGGGGTTGT AGCGACCCGA CCCGGACCGC TCTTGGCTGC CTGCGAACGC TTCGAAATAC TCTTGGCCGG GGTTGGAGGA CACGCCGCCA TGCCACACTT GACGATCGAT CCAATCGTCA CCGCGAGCGC GATTGTCATG AACTTACAAA CCATCGTGTC GCGGACCATT AGTCCGCTCG AATCCGGAGT TTGTAGCATT ACCAAAATCG AAGGTGGGGA TGCCTTTAAC GTTATTCCGC ATTCGGTACT GTTGCGGGGG ACGATTCGAG CGCTTCGTAC GGAAACGTTG CTGAGTCTGC GGGACAAGGT CGAGCATATT GTGGAAAGTA CGGCGGCCAC GCACGGATGT AACGTGACGA TTTCCTATTC TCCGGATTAT TATCCACCGA CCGTGAACGA TCCGGACTTG TACGAGACAT TTGCCAAACA CGTGGGTGCT ATGGTATCAT CGGAAGGAGT CATACGGGAT ACGGAACCCA CCATGGGCGC CGAAGACTTT TCTTTCGTGG CCGAAAGCAT TCCAAGCGCA TTTTTCTTGC TCGGGCAAGG CAGTGGCACG GATCCGCCTA CTGATTACGG GTTGCATCAT CCCCATTTTG CCTTGGACGA ATCGGTTCTG CCGCAGGGCG TCGAGTTGCA CGTCAATTTG GCTCTGCGAG CCTTGCAGAA A
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Protein sequence | DALIHTRRTL HQRPELMYQE SQTSAIVQKA LTEMGISNFT TGWAVNTHPD VIPGPGGYGI VVDIGTGQAP CVLLRADMDA LPILEQTTNV DAFRSQTDHQ MHACGHDGHT TMLLGAAAIL KGMEASLPGT VRIMFQPAEE GGAGAKRMRE EGVLKQAPQP SYAFGMHVWP TLPSGVVATR PGPLLAACER FEILLAGVGG HAAMPHLTID PIVTASAIVM NLQTIVSRTI SPLESGVCSI TKIEGGDAFN VIPHSVLLRG TIRALRTETL LSLRDKVEHI VESTAATHGC NVTISYSPDY YPPTVNDPDL YETFAKHVGA MVSSEGVIRD TEPTMGAEDF SFVAESIPSA FFLLGQGSGT DPPTDYGLHH PHFALDESVL PQGVELHVNL ALRALQK
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