Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13710 |
Symbol | |
ID | 7202025 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 473267 |
End bp | 474511 |
Gene Length | 1245 bp |
Protein Length | 350 aa |
Translation table | |
GC content | 45% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181385 |
Protein GI | 219122087 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | CCTCTGCATT TTGAGTTACA TTCGTCAATC TCGAGTATTT CAGAAGACAC ATGGGATGCT TGTCATTCTT CTTCGCCGTT CCTCAAACAT TCTTGGATAA GATGCCTGGA AGAATCGAAT TGTGCTTCAC GTTCTACTGG ATGGGTACCC CAACATGTCT CCATTAGAAT TGGTAAGCAA CTTGTCGGCT ACGTTCCGTT GTACATCAAA GAGCATTCAC TGGGAGAGTT TGTCTTTGAC CAGTCCTGGG CGGAAGCAGC ATATCGAAAT CGGATTGATT ATTATCCCAA GCTTTTGTCT GGTATTCCAT TTACACCAGC CACAGGCGAC CGAATTTTGT GGATGCCATC GGTGTCCGCA ACATACTGCA ATTCGGACTT GTCATCGTTT CGAGGGGCCG TGGGTGAATT TTTGCGTCAG TTGGCAATCA CCAACAAGCT TAGCAGTGTA CATATAAATT TTCTCAGAGA CGAAGAAGCA ACGGCCTTGG CGGGAGGGTT GGACCAGGTA GATACCAAAC TGAAGTCTCT ACCTCGATCA ATGCAGTCCC TTTTAGAGTC TCTGAAAGGT GTCAAAGACG ACTATATTAG GAGAACTTCT CTACAATATC ACTGGTGCAA TCGAAATCCG AACAATAGTA ACATGCCATA TGACTCATTT GATGACTATC TGAGAGCTTT CAAGAGTAAG CGACGAATAG CTATTCAGCG TGAACGGAGC TCAGTTAGAG AGGATCAAGG TATTCGTATC GACACTGTTA GCGGCGAAGA GATTCGCAGA CACCCCGGTC TAGTCGCCCG TATGTTTGAT ATCTACTTGG CAACTATTCA AAAGATGTCC TTTTGGGGTC GACAATACTT GACTTTGGAA TTTTTTGAAC TGCTAGTGAG ATCTGACTTT TGCAAGCATC TCTGTTTCAT TTGCGCTCGT CATAATTCGA CTGGAGCCGA GCTCAAAGCT GAAGATGTTT TTGCCGGGAC CATCAGTGAG TGAACCATTA TAGGAAACAA TGGAGTTTCA ACTAATTTCG GCTTCGTCCT AACCATTTTT GTCGGCTGAT ATACAGATAT CGTAATGGAT GGAATATTCT ACGGACGTTA CTGGGGATGT CTTACCGAGC ACTTAATCAA AAACTTGCAC TTCGAAGTGT GTTATTGGTC AGCGATTGAT TTCTGCATCA AAAATGGCTT GACCCGCATG GAACCAGGCG CAGGCGGTGG CGACTATAAA TGGGCACGAG GGTTT
|
Protein sequence | PLHFELHSSI SSISEDTWDA CHSSSPFLKH SWIRCLEESN CASRSTGWVP QHVSIRIGKQ LVGYVPLYIK EHSLGEFVFD QSWAEAAYRN RIDYYPKLLS GIPFTPATGD RILWMPSVDE EATALAGGLD QVDTKLKSLP RSMQSLLESL KGVKDDYIRR TSLQYHWCNR NPNNSNMPYD SFDDYLRAFK SKRRIAIQRE RSSVREDQGI RIDTVSGEEI RRHPGLVARM FDIYLATIQK MSFWGRQYLT LEFFELLVRS DFCKHLCFIC ARHNSTGAEL KAEDVFAGTI NIVMDGIFYG RYWGCLTEHL IKNLHFEVCY WSAIDFCIKN GLTRMEPGAG GGDYKWARGF
|
| |