Gene PHATRDRAFT_13710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_13710 
Symbol 
ID7202025 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011680 
Strand
Start bp473267 
End bp474511 
Gene Length1245 bp 
Protein Length350 aa 
Translation table 
GC content45% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002181385 
Protein GI219122087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTCTGCATT TTGAGTTACA TTCGTCAATC TCGAGTATTT CAGAAGACAC ATGGGATGCT 
TGTCATTCTT CTTCGCCGTT CCTCAAACAT TCTTGGATAA GATGCCTGGA AGAATCGAAT
TGTGCTTCAC GTTCTACTGG ATGGGTACCC CAACATGTCT CCATTAGAAT TGGTAAGCAA
CTTGTCGGCT ACGTTCCGTT GTACATCAAA GAGCATTCAC TGGGAGAGTT TGTCTTTGAC
CAGTCCTGGG CGGAAGCAGC ATATCGAAAT CGGATTGATT ATTATCCCAA GCTTTTGTCT
GGTATTCCAT TTACACCAGC CACAGGCGAC CGAATTTTGT GGATGCCATC GGTGTCCGCA
ACATACTGCA ATTCGGACTT GTCATCGTTT CGAGGGGCCG TGGGTGAATT TTTGCGTCAG
TTGGCAATCA CCAACAAGCT TAGCAGTGTA CATATAAATT TTCTCAGAGA CGAAGAAGCA
ACGGCCTTGG CGGGAGGGTT GGACCAGGTA GATACCAAAC TGAAGTCTCT ACCTCGATCA
ATGCAGTCCC TTTTAGAGTC TCTGAAAGGT GTCAAAGACG ACTATATTAG GAGAACTTCT
CTACAATATC ACTGGTGCAA TCGAAATCCG AACAATAGTA ACATGCCATA TGACTCATTT
GATGACTATC TGAGAGCTTT CAAGAGTAAG CGACGAATAG CTATTCAGCG TGAACGGAGC
TCAGTTAGAG AGGATCAAGG TATTCGTATC GACACTGTTA GCGGCGAAGA GATTCGCAGA
CACCCCGGTC TAGTCGCCCG TATGTTTGAT ATCTACTTGG CAACTATTCA AAAGATGTCC
TTTTGGGGTC GACAATACTT GACTTTGGAA TTTTTTGAAC TGCTAGTGAG ATCTGACTTT
TGCAAGCATC TCTGTTTCAT TTGCGCTCGT CATAATTCGA CTGGAGCCGA GCTCAAAGCT
GAAGATGTTT TTGCCGGGAC CATCAGTGAG TGAACCATTA TAGGAAACAA TGGAGTTTCA
ACTAATTTCG GCTTCGTCCT AACCATTTTT GTCGGCTGAT ATACAGATAT CGTAATGGAT
GGAATATTCT ACGGACGTTA CTGGGGATGT CTTACCGAGC ACTTAATCAA AAACTTGCAC
TTCGAAGTGT GTTATTGGTC AGCGATTGAT TTCTGCATCA AAAATGGCTT GACCCGCATG
GAACCAGGCG CAGGCGGTGG CGACTATAAA TGGGCACGAG GGTTT
 
Protein sequence
PLHFELHSSI SSISEDTWDA CHSSSPFLKH SWIRCLEESN CASRSTGWVP QHVSIRIGKQ 
LVGYVPLYIK EHSLGEFVFD QSWAEAAYRN RIDYYPKLLS GIPFTPATGD RILWMPSVDE
EATALAGGLD QVDTKLKSLP RSMQSLLESL KGVKDDYIRR TSLQYHWCNR NPNNSNMPYD
SFDDYLRAFK SKRRIAIQRE RSSVREDQGI RIDTVSGEEI RRHPGLVARM FDIYLATIQK
MSFWGRQYLT LEFFELLVRS DFCKHLCFIC ARHNSTGAEL KAEDVFAGTI NIVMDGIFYG
RYWGCLTEHL IKNLHFEVCY WSAIDFCIKN GLTRMEPGAG GGDYKWARGF