| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_13643 |
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| Symbol | HCL1 |
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| ID | 7202194 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011680 |
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| Strand | + |
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| Start bp | 823057 |
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| End bp | 824108 |
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| Gene Length | 1052 bp |
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| Protein Length | 321 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | hydroxymethylglutaryl-coenzyme A lyase |
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| Protein accession | XP_002181269 |
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| Protein GI | 219121846 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.404031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATACCG TACCGACACT TTTGGTTCCA CCGCGAGTCA AAATTGTCGA AGTTGGGCCC
CGAGACGGCT TACAGAACGA ACCCGTCAGC GTCTCCACGG AGGACAAAAT TAAACTCGTA
CAAAAGCTGG CTCAGGCGGG CTGTCGCTAC ATCGAAGCTG GAAGTTTCGT CTCACCAAAA
TGGGTTCCCA GCATGGCGAA TTCATTTCAA ACAATGACTA AGTTAAGAGA ATGGAAAGAG
AAGCAAGGGC CAGAATACGA GCCACTGGTC TTGTCTTGTC TCGTGCCTAA TCTCGCAGGC
CTTCACCAAG CGATTCAGGT AAAGGCTGGA GAGATTGCCG TATTTGGATC TGCGAGTGAG
ACTTTTTCCA ACAAGGTGCG TCTTCCAAGA ATTGATATCA AAGTGCGTGC TGCGTGTCCT
TGGTTGGGTC TCATCTGATA CGATTTTACC TTGTCGCCTA GAACATAAAC TGCAGTATTG
ACGAGTCACT GGAGCGCTTC GCGCTGGTCG TTGCCGAGGC CAACACCGCT AGAATTCCCG
TGCGAGCCTA CTTGTCCTGT GTCATTGGTT GTCCTTACCA AGGAAGGATC CCACCATTAG
CCGTAGCCCA GATGGCGGAA AAATTATTAG CTTTGGGCTG TCACGAATTG TCGTTGGGTG
ATACGATTGG GGTCGGGACA CCCACAACCA CAATCGCGCT GTTGAAGGAA CTGCAACACG
TCCTGGGGAA CGACGTAGAC AAACTAGCCG TTCATTTTCA CGACACACAT GGTCAAGCTT
TGGCTAACAT TTTGGTATCC TTGGAAAGTG GGATCGCGAC GGTCGATGCT TCCGTTGCGG
GGCTTGGAGG TTGTCCGTAT GCCCCTGGAG CGTCGGGCAA CGTGGCGACC GAAGATGTTG
TCTACATGCT GAATGGTTTG GGTGTTGAGA CGGGGATTGA TCTTGACAAG CTTGTAGAGG
CTGGTGACTT CATTTGCGAG GTTTTGGACC GCCCTTCCAG ATCTAGGGCA GGGACAGCCA
TTTCTGCCAT ACAGAAGCGG AAAGCACCGT AG
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| Protein sequence | MHTVPTLLVP PRVKIVEVGP RDGLQNEPVS VSTEDKIKLV QKLAQAGCRY IEAGSFVSPK
WVPSMANSFQ TMTKLREWKE KQGPEYEPLV LSCLVPNLAG LHQAIQVKAG EIAVFGSASE
TFSNKNINCS IDESLERFAL VVAEANTARI PVRAYLSCVI GCPYQGRIPP LAVAQMAEKL
LALGCHELSL GDTIGVGTPT TTIALLKELQ HVLGNDVDKL AVHFHDTHGQ ALANILVSLE
SGIATVDASV AGLGGCPYAP GASGNVATED VVYMLNGLGV ETGIDLDKLV EAGDFICEVL
DRPSRSRAGT AISAIQKRKA P
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