Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_13553 |
Symbol | |
ID | 7202236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011680 |
Strand | - |
Start bp | 149351 |
End bp | 150103 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002181311 |
Protein GI | 219121934 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0118726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTTCG TGCTATCATT CTACTGGACG GCGCAAGTTG GCAAGAATAT TCTCCATGTC ACTGTATCGG GTGTTGTTGG TACTTGGTGG TTTGCTCCTG AGGATGCTAG TAGCTTTTGC TCCCCTGCAA TCAACGATTC ACTGTTGCGA GCTACAACTT ATTCTCTTGG AAGTATTTGT TTAGGTAGCC TCTTGACGGC ATTACTGCAA TTTGCTTGTC AATTGACGAG AGAAGCCAGA CGTCACACGC GATGCAACGC AATACTCCGT TGTGTTCTTG AGTGTCTCGT GGATTTTCTC GAACGGCTTG TGGCATACTT TAACCAGTGG GCTTACGTGT ACGTCGGTCT CTACGGGTAC GACTACTTAA CAGCGGGTCG CAGGACGATG TCTCTCTTTA TGGAACGAGG ATGGACAATC ATCATCAACG ATAATCTTGT CCTCAGAGTA CTTGGTTTAA TGAGCGTGTT GATGGGTTTC CTCACGGGAT GTTTCGGACT CATCATAGCT TCGATCAAGT CCTCTTGGCT AGAGGATTTT GGAAACTCTG CAGCCTCCGT CGCCTTTTGC ATTCCGTTTC TTATCGGAGC CGCGGTGGCG TATGCTTTGA TGAGTGTGGT CGCCTCCGCC ATCGATACGG TTCTTGTTGC TTTCGCGGAA GGTCCTTTAG ATTTTGAAAG GAACCATCCT GGTCTATATA CACAAATGAT TACTGCATGG CGTCAAGTCT ACCCCGAAGA ATTTGGAATG TAG
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Protein sequence | MMFVLSFYWT AQVGKNILHV TVSGVVGTWW FAPEDASSFC SPAINDSLLR ATTYSLGSIC LGSLLTALLQ FACQLTREAR RHTRCNAILR CVLECLVDFL ERLVAYFNQW AYVYVGLYGY DYLTAGRRTM SLFMERGWTI IINDNLVLRV LGLMSVLMGF LTGCFGLIIA SIKSSWLEDF GNSAASVAFC IPFLIGAAVA YALMSVVASA IDTVLVAFAE GPLDFERNHP GLYTQMITAW RQVYPEEFGM
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