Gene PHATR_51005 details

Gene Information

• Locus tag: PHATR_51005
• ID: 7204673
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011679
• Strand: -
• Start bp: 534010
• End bp: 536263
• Gene Length: 2254 bp
• Protein Length: 651 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002185904
• Protein GI: 219121358

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACTATCGTC AAGTATTCTG CCCGGACTCC CGGACGTCAA GTCCGATCAA ACCGTCGTCG 
ATGCGATACC GTCCACCTGG ATTCGCGGGG AACGCATGCC CTACAGTGTC CTCTGTCAAG 
CCTTTACCGA CATTGAAGCC GTCACCAGTC GACTCCTCAT CCAACAAATC TTCACCACAC 
TCTTGCGTCA AATCGCCGTA CAGAATCCCG TCGATCTCTA TCCCGTTCTC TACTTGGCCT 
CCAACGACGT CGCACCCGCC TACGAATGCG TCGAACTCGG CGTGGGCGAT TCCATTCTCG 
TACGCGCCAT CGGTGAAGCC ACCGGAACCA ACCCCGCTAT GGTCAAGAAA CGCTACGAAG 
AGATTGGGGA CCTCGGGGAC GTGGCCAAGT CCTTCAAAAG CAAGCAGCGG ACCCTCGGGG 
GATTCTTTCA AAAATCCGTC GCTCCCAAAA AGCCCCTCAC CGCGGCACAA GTACTCCACG 
TCTTTCGGGA AATCGCACAA ACCAAGGGCA ACCAGTCGCA AAAATGGAAG GTCGAAAACA 
TCAAGAAACT CATCGTACAA GCCACGGAAG CCACCGAAAC CAAATACATT GTCCGGGGCT 
TGCAAGGCAA ACTTCGCATC GGATTGGCGC AGTCCACCGT ACTCATTGGA CTCGCCCACG 
CACTCGCCCT GACCCCGCCC ATCACGCTAT GCCCCCACCA ACCCACTCTT GCGGAACTCG 
GTACGTGCCA TTGCAAACAT TCTTGACAAT CTGATACCAA TTCTAAAACC AGTGTGTGAT 
GTTTGTGTAT TGTTGCTCGA TTGGTTACCT GGCTGGCTGG CTGGCTGACT CTTTGCAGAA 
GACTATCCTG CCGAAGCCCG ACAGTACCTG GACGATACGC TTCCTTCGGA AAAGCGCATG 
GAAGCCGCCG TAGCGATTGT CAAAAAGGCC TACTCCGAAG TCCCTTCCTA CGACGCCATT 
GTTAACGGGG CAGCCAAGGT TCCCTTACAC CAGCTGCACC GTGCTTGCAC TCTGACACCC 
GGGATTCCTG TCGCCCCGAT GCTGGCCAAA CCCACCAAGT CCATACAGGA AGTCTTGAAG 
CGTTTGAGCG GACTCCGGTT TACCTGCGAA TACAAGTACG ATGGGGAAAG GGCTCAGGTG 
CACCTGCTCC CGGACGGTAC CACCCGTGTG TTTTCGCGGA ACTTGCTGGA CACGTCGGAA 
AAGTATCCCG AAGTGCCGCT GTTCGTCAAG GAGGCTTGCC GGAACGTGGA ATCGTTCGTA 
TTGGATGCCG AAGTGGTTGC CTACAACAAT AAAACCGGAC AGCTCGTGCC CTTTCAAATT 
CTGTCGACCC GCAAAAAGAC GGAAGAGTCA GCCGAGACGG CCAAGGTACA AGTTATCGTG 
CAGGCCTTTG ATCTCATGTA CCTCAACGGC AAGTCTCTGC TCAATCAGAC CCTCGCCGCG 
CGTCGATCCC TACTCATGGA GCACTTTGAA GCCGTGCCGG GAAAATTCCA GTTCGCCAAG 
TCGCTGGACC ACAAAGAAGA TGGGGATACA ACTGTACTGG AAGAATTTTT GGACAGTGCC 
GTCAAGGGAC AGTGCGAAGG TCTCATGGTC AAAACTTTGG AAGTAAACGC CATTTACGAA 
CCGTCCCGAA GATCGCTCAA TTGGCTTAAA CTCAAGAAAG ATTACCTCGA TGGGCTGGGG 
GACTCGGTCG ACCTGGTCCC GCTAGGTGCC TACCACGGCA GGGGCAAGCG TACCGGCTTT 
TATGGTGCCT ACCTGCTCGC CTGCTACGAT TCGGAAACGG AAGAATTCCA GAGCGTGTGC 
AAGATTGGCA CGGGCTTTTC GGAAGAGGAT CTCAAGTCCC TGGCCGAAAA TTTGAACCAG 
CACGTGATTC CGACCAAGAG TCAACAGTAC AGTGTATCCG ATGTTTTGGA GTGCGACGTT 
TGGTTCGATG CCGTGCAAGT GTGGGAGATC AAGGCCGCCG ATTTGTCCAA ATCGTCGACG 
CATCGCGGTG CTGAGGGGAA AACCGGGGAG GAAGGTCGCG GTATTGGCTT GCGCTTTCCA 
CGTTTTGAAC GTATTCGGGA CGACAAACGA CCCGAAGAGG CGACGACGAG CGATCAGATT 
CTGGAAATGT ATTATCAGCA GGATGCAATT GCAGGCAATG ACGATGATGT CGAGGATGAT 
GGAATATAAG CCGAAAGATA GGGAATTTTG GAAGGACGCC ATGAGAGTTC GTTTGAGTAC 
TGAAATTTAG GATTAAAGAA ATGTATATTT CTGA 

 

Protein sequence

MPYSVLCQAF TDIEAVTSRL LIQQIFTTLL RQIAVQNPVD LYPVLYLASN DVAPAYECVE 
LGVGDSILVR AIGEATGTNP AMVKKRYEEI GDLGDVAKSF KSKQRTLGGF FQKSVAPKKP 
LTAAQVLHVF REIAQTKGNQ SQKWKVENIK KLIVQATEAT ETKYIVRGLQ GKLRIGLAQS 
TVLIGLAHAL ALTPPITLCP HQPTLAELED YPAEARQYLD DTLPSEKRME AAVAIVKKAY 
SEVPSYDAIV NGAAKVPLHQ LHRACTLTPG IPVAPMLAKP TKSIQEVLKR LSGLRFTCEY 
KYDGERAQVH LLPDGTTRVF SRNLLDTSEK YPEVPLFVKE ACRNVESFVL DAEVVAYNNK 
TGQLVPFQIL STRKKTEESA ETAKVQVIVQ AFDLMYLNGK SLLNQTLAAR RSLLMEHFEA 
VPGKFQFAKS LDHKEDGDTT VLEEFLDSAV KGQCEGLMVK TLEVNAIYEP SRRSLNWLKL 
KKDYLDGLGD SVDLVPLGAY HGRGKRTGFY GAYLLACYDS ETEEFQSVCK IGTGFSEEDL 
KSLAENLNQH VIPTKSQQYS VSDVLECDVW FDAVQVWEIK AADLSKSSTH RGAEGKTGEE 
GRGIGLRFPR FERIRDDKRP EEATTSDQIL EMYYQQDAIA GNDDDVEDDG I