| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_46953 |
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| Symbol | |
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| ID | 7204769 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011679 |
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| Strand | - |
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| Start bp | 912593 |
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| End bp | 915105 |
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| Gene Length | 2513 bp |
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| Protein Length | 635 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185979 |
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| Protein GI | 219121513 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00635036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTCTGTCAAC AATGTTGTCT CGCGTTCGTC ACGGTAGCTG TCAGCATCTG TCATCGACGA
TCGTTCACTT CCGAATCCGT TTTCGGGTTT GAAGCTATCA GCATTTCACC AAAGATCCTC
CATTTGTCCC CTACGAAACA CTCTTGGTGG TTACGTTTCT ATCCTTCCAA CAGAGAAGCG
CTTGCTACGC AATCTGTAAT AGCTCCGTTT CCAGGCAGAA CACTTTCGAC TCTGAGTTGT
CGGGATCTAT CGACGGACGG AAGGAACATC CATACACGTA TCGCATTTAC GTATCGCATA
CACGCACCCG TCGTCGACAC GAAAAGGATG AACGCGTTTA CTACGGGACC GGAGTCAACT
GCTGCCGACC GCCATAACAG ACGCGCCACG GGAATTTCTT CCGAGGCAGA AGAACGCCGG
ATGGAAACCT TGGAAATCAT GAACACACCA GTCGAAAACG ATGCGGAAGA GGAGAATGAT
GATGACGACG ACGAAGAAGA AGAGGCGCTG GCGCCTGTTG CTGGATGGAG ATTCTGGTGG
ATCTTTGCCA GGTTTCCGCT GGGTCTGCTC CTCGTTAACA CGATCCTTCT CGCTTTAATC
ACCCTATACA ATCCACAATA CTCGCCTTCG TATATTGTGG GAAACTCGAC GGACGTTGAA
ATGAACGACG ACTTCGATTC CGACGAGCGA AGGGATTTCG GGCTTGCGCA GTTCAGTGCG
CTCGAACTGC AATCATGGAT TGTCAAATGC GGGATGGTAG CCCTCTTAGC TTGCCTGGAT
GCTATTGTCT TTTACTGGTT CACAGTACGT CTCAAGAAGG GCATGGAATT GCTTGCGCAA
AAGGCTCAGC AAGAAGAGCC TCAAGGACGG CCAGTCGCAA ATGAGAATCT GAGCAGGACA
AGAACGGCAC CGTTGCACAA GTTGGACTTG AACTACAGCG AACTGGACCA AGTACACGCT
CGGGTGACCC AAAAGATAGA CTCGTATCTA TTTAGGGACC CAGCGCGGCA ACCGACCGTC
CCAATCTTGG TCAGCCTGTT GTACCTACTG ACGGCACTCA CAGTGACTGC TTGTCTGACT
ACGCTATCAC TTTTGATATT TTTGTACAGC TCCGAAGGAT CTTCCATGTG CTTGGAGAGC
ATCACATCAC AGTCAAGTGA ATCCGTGGAA TTTGATATTG ACTCGATTGA AAATATCCCG
CAAGAGTTAC AGGAATGGGC AAGTCCGAGA TATTCATATT CTGATGGATC ATCATACATT
CATATGAGTG ACGGAACTAC TTACTTTCGC GGTAGAATGG CCGAAAAGGA ACATCATGGT
TGGGATTCCT ATATGGATAC GGAAACACTA GTTGCGACCA ACGTAAATGG AAATCTTACT
GTGTACAGTC AACTCCACGA ACCGCATAGC TTCGTGAGTA TTAACGAAGG TTCTGGTGAA
ACAATGGAAG GATTCTGTTT CCTCTATACG GAGTTTGCTG GACACGACGA CGAGGAAATA
TATGAATACA CAACGCAAGC AGTTGCGTGT GTATCTTCCA ATGAAAACAT AAGTCAGGGA
TTTCGAAACA CAACTCTTCT AAACAGTGAC GGAGGGGGAT GGTTAGAATC CGTTGGCAAA
GCTCACGATG GACGATACTG GATCAGGCTG CAAGAGGATA GATTTGTTGA TGAGTGGTCG
TCGTATCAAG AGGTTTTGCA TATCATACAG CTGGACCCGC AGTCGATGAT GTATACTGTA
GTTGTAAACT CAACTTCCTT CCCCGATTTT CAACAACCCT TGAGGAACGA AGGAAGTAGA
TGTTTCCGCT GGACTAGCGG CATTGGGTAC GTTGCTGCCG CAATATCTCT GTTTCTTTCG
GCGCTGGTGC TCCTACTATT CATCAAGACA AAGTCGGGAG CAGGTTGCTT GGCGTTGTCT
ATCTTTGCAG TCCGACTTTG GCTGGAAGAA ACTTGGCTAG ACGAAACTTG GCTAGACATG
CTGAGTCCAG TATTGCTTGT TTTTACATTC ATATGCTTGT GCACGGCATC ACTCAGCCTT
GCCGTCCGAG AGATGGTGTT ATGGGGAATA TATAGCGTCA TTGTGGTGCA ATTGGTTTTA
GCTTTTGTGA ACCGAGAATT TCCGGTAATG GGGACTATTG GACTAGGTAT GGGCCTCGCG
CTGGACCATC CTGTACTTCA GCTGGGTGGG TGGATCGGAG CGCCTTTATC GGTTTGTATT
CTCTTGTACT ATGCGATAGT TGGCTATTTC GGCAACACTT ATGGTGGCTA CTTCTACTAT
GATCGACAGT ATACTACTAC TCTACTGATT GTTGCATGCA TCCCTGTAAG TATAATTATC
GGTTGCGGGA TGGTGACGGC AGGCCTTTAC TTTTCAAGGT CTCGTGCAGT CTTGTTGTTC
TATCTGAGGC GCTTCTGGCG ATCTCTTCGT GTGAAACTGC GGAGGCGAAG TCGGCCTCAA
AGCAGCAATA GCGAAATGGT CTAGTTCACA TAAAATTCTT GTTTGTATTT ATG
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| Protein sequence | MNAFTTGPES TAADRHNRRA TGISSEAEER RMETLEIMNT PVENDAEEEN DDDDDEEEEA
LAPVAGWRFW WIFARFPLGL LLVNTILLAL ITLYNPQYSP SYIVGNSTDV EMNDDFDSDE
RRDFGLAQFS ALELQSWIVK CGMVALLACL DAIVFYWFTV RLKKGMELLA QKAQQEEPQG
RPVANENLSR TRTAPLHKLD LNYSELDQGP SAATDRPNLG QPVVPTDGTH SDCLSDYAIT
FDIFVQLRRI FHVLGEHHIT VKMAEKEHHG WDSYMDTETL VATNVNGNLT VYSQLHEPHS
FVSINEGSGE TMEGFCFLYT EFAGHDDEEI YEYTTQAVAC VSSNENISQG FRNTTLLNSD
GGGWLESVGK AHDGRYWIRL QEDRFVDEWS SYQEVLHIIQ LDPQSMMYTV VVNSTSFPDF
QQPLRNEGSR CFRWTSGIGY VAAAISLFLS ALVLLLFIKT KSGAGCLALS IFAVRLWLEE
TWLDETWLDM LSPVLLVFTF ICLCTASLSL AVREMVLWGI YSVIVVQLVL AFVNREFPVM
GTIGLGMGLA LDHPVLQLGG WIGAPLSVCI LLYYAIVGYF GNTYGGYFYY DRQYTTTLLI
VACIPVSCSL VVLSEALLAI SSCETAEAKS ASKQQ
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