Gene PHATR_46770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46770 
Symbol 
ID7204533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp405588 
End bp407140 
Gene Length1553 bp 
Protein Length412 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185698 
Protein GI219120933 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGCTTTTTCA CGACTACTAG CGAGGGCGCT TTAGAGACTC CTAACGCACT CTACAGAGCC 
TGTATCGTTC TCCCTCCAAT TTGTGTAGAT ATCAAACAAG CATGAAGACT TCTGGCCTTT
TTTTGGCGTG TAGCATAACT GTAAGTGCGG TACCAGGGTC GGCTTTTGTC TTTCCGACGA
AGCAACATCC GAATCGGTGG ACAAGCTCGA AGACGATCTC GTCGGCCCTA TATACTTCAG
CGTCGACTGT TTTCAACACG ACCGCGACAA TTGAAGGGAA CAAACTCGCA ATAGAAAAGA
AGAAGTTGTT AGCCCTTTTG AAGTCGACGG AACCGTTCGA GGACGCCGTT TTGGCAGATC
CCATCACAAA GGAGAGCATC ACGATTACTG CCAAGCCCGT TACCTTTCTT GGAGGCGAGT
CGTCTTCAAA TAATCGTCGT CGAATCAAGT ATTTCATTGA ATCTGCCAGC AACAAGTTTC
AGGGAACGTC CGATACGTTT ATTGACCTAT TGGAGCCGAT TAAGCCGGAG GAATTGACGT
CGGCACCGGA CTCGACTTCT TCCGATGCGC TCGCACGCAA TTTGATTCCG TTTATTCCTC
CGCCACTACG CTCCGCATTC GCGACTGCTG GTTTTCCCAT GGGCGAGGAC TATGTTCCAA
TGCGGGACTT GTTCACATCC CCCGTCGTCA GTGCAGCATA CGAACGGGGA TGGCGACAAG
GTTTCGCCCA AGCTGGTTTT CCTGGAGCAG ACGATGAGGC GCAGCTTGCC ATGGACTATT
TCGCCCCGGT CATGGCTATG AGTGATACCA AAACTTTGGT GGATATGAGC TGTGCTACCG
GCTTATTTAC CCGTCGTTTT GCCAAATCTG GCAAGTATGC TCGTGTTTTG GGATGTGACT
ATTCTGCAAG TATGTTGAAC GAAGCGCACA CTCGGATTCA GGCCAACCCC AGGCTGAACG
GAAATCGCAA CACGCAACTC GATTTGATCC GCCTCGATGT CGGACAAATT CCTATGAAGA
ACGCTTCGGT AGATTGTTTG CACGCGGGGG CCGCGATGCA CTGCTGGCCC GATTTACCGG
CGGCCGCGGC CGAAATTTAC CGTGTATTAA AGCCAGGTGG TCGCTATTTT GCGACAACGT
TCTTGTCGTC CTATTTCGGC ACCTTGCAGC AGGCCGAAGG TGGGGCCAAT GGACCATCGC
GACAAGCGTT TCAGTATTTC GAATCAGTGG AGCAGCTCAA GAGCTTGCTT GTGGACGGAG
GCTTTGCGCG CGAGATGGTT TCGATTGAAG TTCTAAGTCC CGCTTGTGTA GTTATTCGAT
GCGAAAAGAC AAAAAAATAG GCTTCAACGA TTTTGGTCCA CTGCATTATA GTATCGACTG
TCGTTGCCAC ACTTTTAAGT CTCCCGTACG GATGCTGCCC TCACGACGCC GCGATCAATA
TCTCTCCACG CAATTGGAAA TTCGTGAGAC CAGAATGGCT CCTCAATGCC ATGGTAGGAT
AGCATAATTT TGCGAAACTC GCTTTGTTCA GAGGCCCAGA AGTAGTAACT ATC
 
Protein sequence
MKTSGLFLAC SITVSAVPGS AFVFPTKQHP NRWTSSKTIS SALYTSASTV FNTTATIEGN 
KLAIEKKKLL ALLKSTEPFE DAVLADPITK ESITITAKPV TFLGGESSSN NRRRIKYFIE
SASNKFQGTS DTFIDLLEPI KPEELTSAPD STSSDALARN LIPFIPPPLR SAFATAGFPM
GEDYVPMRDL FTSPVVSAAY ERGWRQGFAQ AGFPGADDEA QLAMDYFAPV MAMSDTKTLV
DMSCATGLFT RRFAKSGKYA RVLGCDYSAS MLNEAHTRIQ ANPRLNGNRN TQLDLIRLDV
GQIPMKNASV DCLHAGAAMH CWPDLPAAAA EIYRVLKPGG RYFATTFLSS YFGTLQQAEG
GANGPSRQAF QYFESVEQLK SLLVDGGFAR EMVSIEVLSP ACVVIRCEKT KK