Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_46770 |
Symbol | |
ID | 7204533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 405588 |
End bp | 407140 |
Gene Length | 1553 bp |
Protein Length | 412 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185698 |
Protein GI | 219120933 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TGCTTTTTCA CGACTACTAG CGAGGGCGCT TTAGAGACTC CTAACGCACT CTACAGAGCC TGTATCGTTC TCCCTCCAAT TTGTGTAGAT ATCAAACAAG CATGAAGACT TCTGGCCTTT TTTTGGCGTG TAGCATAACT GTAAGTGCGG TACCAGGGTC GGCTTTTGTC TTTCCGACGA AGCAACATCC GAATCGGTGG ACAAGCTCGA AGACGATCTC GTCGGCCCTA TATACTTCAG CGTCGACTGT TTTCAACACG ACCGCGACAA TTGAAGGGAA CAAACTCGCA ATAGAAAAGA AGAAGTTGTT AGCCCTTTTG AAGTCGACGG AACCGTTCGA GGACGCCGTT TTGGCAGATC CCATCACAAA GGAGAGCATC ACGATTACTG CCAAGCCCGT TACCTTTCTT GGAGGCGAGT CGTCTTCAAA TAATCGTCGT CGAATCAAGT ATTTCATTGA ATCTGCCAGC AACAAGTTTC AGGGAACGTC CGATACGTTT ATTGACCTAT TGGAGCCGAT TAAGCCGGAG GAATTGACGT CGGCACCGGA CTCGACTTCT TCCGATGCGC TCGCACGCAA TTTGATTCCG TTTATTCCTC CGCCACTACG CTCCGCATTC GCGACTGCTG GTTTTCCCAT GGGCGAGGAC TATGTTCCAA TGCGGGACTT GTTCACATCC CCCGTCGTCA GTGCAGCATA CGAACGGGGA TGGCGACAAG GTTTCGCCCA AGCTGGTTTT CCTGGAGCAG ACGATGAGGC GCAGCTTGCC ATGGACTATT TCGCCCCGGT CATGGCTATG AGTGATACCA AAACTTTGGT GGATATGAGC TGTGCTACCG GCTTATTTAC CCGTCGTTTT GCCAAATCTG GCAAGTATGC TCGTGTTTTG GGATGTGACT ATTCTGCAAG TATGTTGAAC GAAGCGCACA CTCGGATTCA GGCCAACCCC AGGCTGAACG GAAATCGCAA CACGCAACTC GATTTGATCC GCCTCGATGT CGGACAAATT CCTATGAAGA ACGCTTCGGT AGATTGTTTG CACGCGGGGG CCGCGATGCA CTGCTGGCCC GATTTACCGG CGGCCGCGGC CGAAATTTAC CGTGTATTAA AGCCAGGTGG TCGCTATTTT GCGACAACGT TCTTGTCGTC CTATTTCGGC ACCTTGCAGC AGGCCGAAGG TGGGGCCAAT GGACCATCGC GACAAGCGTT TCAGTATTTC GAATCAGTGG AGCAGCTCAA GAGCTTGCTT GTGGACGGAG GCTTTGCGCG CGAGATGGTT TCGATTGAAG TTCTAAGTCC CGCTTGTGTA GTTATTCGAT GCGAAAAGAC AAAAAAATAG GCTTCAACGA TTTTGGTCCA CTGCATTATA GTATCGACTG TCGTTGCCAC ACTTTTAAGT CTCCCGTACG GATGCTGCCC TCACGACGCC GCGATCAATA TCTCTCCACG CAATTGGAAA TTCGTGAGAC CAGAATGGCT CCTCAATGCC ATGGTAGGAT AGCATAATTT TGCGAAACTC GCTTTGTTCA GAGGCCCAGA AGTAGTAACT ATC
|
Protein sequence | MKTSGLFLAC SITVSAVPGS AFVFPTKQHP NRWTSSKTIS SALYTSASTV FNTTATIEGN KLAIEKKKLL ALLKSTEPFE DAVLADPITK ESITITAKPV TFLGGESSSN NRRRIKYFIE SASNKFQGTS DTFIDLLEPI KPEELTSAPD STSSDALARN LIPFIPPPLR SAFATAGFPM GEDYVPMRDL FTSPVVSAAY ERGWRQGFAQ AGFPGADDEA QLAMDYFAPV MAMSDTKTLV DMSCATGLFT RRFAKSGKYA RVLGCDYSAS MLNEAHTRIQ ANPRLNGNRN TQLDLIRLDV GQIPMKNASV DCLHAGAAMH CWPDLPAAAA EIYRVLKPGG RYFATTFLSS YFGTLQQAEG GANGPSRQAF QYFESVEQLK SLLVDGGFAR EMVSIEVLSP ACVVIRCEKT KK
|
| |