Gene PHATR_46672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_46672 
Symbol 
ID7204410 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp143222 
End bp148883 
Gene Length5662 bp 
Protein Length1347 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185831 
Protein GI219121206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.390324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAGATACAA GCCAACTAAC TGAAGGAATG AAACAGCTCC AGGGATAGTT TTGTGAGATC 
CGGCCCGACG GCGAGTTAGG AAAGCCTTTT GCGATGGACA AACCTGAACT TGATGGAACT
TCAGAAATCT TGCAATTAAC GAAGGCGCTT CTCGAATATT CCAAAAAAGC GCGCTCAGGA
AATCTGATGT TGCCTTCTAA TCCTCGATCT TCAATCTGGA AAAGAGTGGT GATGGCGGCC
ATCTGACACG AGCTCTAGCT AAAGGTCAAC AGAATATGTT GACACCATCC TTCTGGATCA
CACTTAGAGA ACCAGTTTCC AAACGAATAA CAGAAATGGA CGAAACCCTC CATGGAAGCA
TCTAGAAGCA TCGACACTGG GTCGAAGAAT GTCAATTCTC TTGATACGGA CCAATCATAG
GGACCTCGCG GAGGGCTCAC GCTTACACTT AAGTGCAAAT GCGCTGGTGA GTACACAGAA
CATCAGATGC TTCAAAATAT TGTGTACCTA CCACTACATT CTTTTTTTGA CAAAAACCCT
CGTTACGATT GGTTGGCGTG TAAAAAAGCT CACAACAATC TCACCCCGAA TTTAATCGCC
ACGATGTCGA TATCTATTGA GCACGAAGAC AATACCTTCA AACAAGGCGA GCATGTAGAA
GAAAACATTG TCGATGTCTA CGACGACGAG GAAGAAGTAA TTTCCAACTC TGGATGCGGC
GTTCTCGGAC GTTACCCTGT TCTTTCTGTC CTCATATTTG CAGCTACTGG AATCGGAGTT
GGCCTGGACT TTCTTTCTGG GAACCTGGCG AAGGCGACGA CACCAAGGAA AAGGTTATTA
ACTGGGTAGG TCTCATTGGA GATCTATTCA TCCGTTCGCT GAAGTGCGTT GTTCTTCCTC
TCGTCTTTAT CAACGTCATT ATTTCGGTCG TTGATATGAT GACTATCGGT CGCGCGGGAT
CGATCGGATG GAAAACAATT GGACTGTACT TAACGACTAC TGTTATTGCC TCCATACTGG
GCATCCTTTC TATCTTGTCG TTCAAGCCAC TGTTTGAAGA AGGAACCTTT ACAGCTAGTA
GCCCAGCAAC AATCAAGCTC GGCTGCAACG ACTCTGGTGA ATACAAAACT GAATTGCAAG
ACGGCACCCT TACGTGCACC GCTGATACAG GTAACAGCTC TCAGTTTTTC ATCGAAGATT
TGTCCCAGAG TTTTGTTCGG GCAAGTGGAA GTGTCCGTTC AGATATCTCC CTCAGTGACA
CCATCTACGA AGGCGTGTTT ACAAAGTAAG TCATGTAATC TCCAAAAATG CGTGTGGGCC
TACTTCTACA TCACAGCATC CAAGTACCGA ATACTCAGAG ATGAATTTTC TTCCCTAACA
GGCTAGTTAC TGCAAATATC TTTGAGTCGT TTGTGGAGGC TAATTTCGCG GCCGTTCGCC
ATTGCCTTTA GTGTTGCTTT GAGCAAGGTC TTTGACCGCC AGCGCGACCA CGATACCAGT
TTTATCATCC CTTTTCTGAA AGAGCTGGAC TCTGTGTTTC TGACGATAAT CAACTGGATC
ATTATGTGCA CTCCTTTTGC TGTGCTTTCC TTGATTGCGT CTGCCATTGG AAAACAAGAA
GATCTGGCCG ATTCATTTGC CAACGTGGGG TATCTGGTCG TGGCGACTAT AACTGCTATG
GCTCTGCAAA TTGCCGTAGT CCACTGCCTC ATCTTTGGTT TGGTCACACG AAGCAACCCC
TGGCACTACC TCAAGTATAT GATTCCGGCA CAAACAATGG CGTTTGCGTG TTCAAGCAGT
GCTGCCACAA TCCCCATGAC CCTCAAGTGC GTTCAAAGCA CGAACCGGGT ACCTGAGCCA
GTCGCACGTT TTGTGATTCC TTTGGGTGCG ACCGTGAACA TGGATGGAGG AGCCATTTAT
TTTCCATGCG CCTGCATTTG GCTTGCTGTT TTGAACGGTA TTGACCCCGA TATTGCCTCG
TACTTTTTGC TGGTTATTAT TTCGACAATT GGTAGTGCCG GGACGGCACC GGTTCCTTCG
GCGAGTTTGG TATTAATTAT CACGGCTTAC AACACCGTGT TCAACACAAC TGGCGTGCCC
GAAGGGTTCT CCTATATTCT TGCGATTGAC TGGTTCATGG ATCGTCTACG CACAGTCGTC
AATGTGACGG GAGACACTGT CGTGGCTGGT ATGGTTTCCC ACTTATGTCC CGACGGATTA
CACGAGACAA AGACCCGACA CGATAGCTCT GTGGAAGACG AGCCGTCCAC GGATGAGGAA
GTTGCCAAGG TGGGCTCCAC GTAATTGCGT TTGTGAAGTG TTGACAGTGA GACCTTTCTG
CGAGAAGGAC CGGATTTATA TGTACTTGCA TCTGGACAAC CTACTACAAC CAAGCCACTA
TAGTAATATT TCACTGTAAG TTCTAGGAGC CTTTTGCTTC TCTCCAACTG CTTCGCGCTT
TACCGATAAT AATGTTGGTT TATCAATGCC ATTGCTGGTA TGTGGTTTTA TTGTTAATAT
TAGTACGCCG TTATGCCGGA TAGCGTAAAA CTAGGTCACG GGAAATCGTG AATAAACGAC
ACTGTACCGA CTTCTCCGTG TGTTTTCGAA CCTCCATTGC TTTGATGTGA CGAACAAAAT
GTCGATGGAT AACTTCTTTG TCTCCAACAA ACTTGCTATT GTACTCTCAC TGCTCGCTTT
TCCAAACGCA CTACAACACC TTGACTAGCG CCTTCCCAGT ATGCCTCTTT TTGGCTTTCG
CAAACAACGC AAAGCATCGC GGTCACCGTC TCCGACACGC GGCGCCGCTT CTTCGTCGAC
CGCCAGTCGT GCTAATACCG GAACGACGAG GCCATTACGA AGTCGTCGGA CTCACGTGGA
TAGTGACGAG CGCATGCATA ACCCCTTGGG ATCTCCCATG CTGCTTCCCA CCAATTACGA
TCCCGATGGG CGGCTTGGAC AGAATGCGTA CCAGACTTCG CCGTCGATGA ACACATGCAA
CAATTTTCTG CTGGGTGGAA ACTACTACCC TGGAAAAGAC AAGAAGCGAC GGCACTATCG
GACAAAGGCT ATTTGGTATC GGATATTCTG TTCAAGCGGA CCGAGACAGA TTGTGACTTT
TATCGTTTCT CTCTACTTGT TTCTGTGGCT GCCGATTACG CACTTGCTTT CCACATCCCA
GGCTCCAAGC TTGACGAATT TTGACTGGCT CTTGCGGGAT ACTACTTTGC AATTACCCAC
CATGGAAGAA CAGCGTGATA CGGCATCCAA GTTAAACATT GAACGCGATC AGCTGGATGC
CGAGGGGGGT ATATCGGACC GGCTACGAAT ATTAGAAAAA ATTGTGCCGG ACTGGTTTCA
CAGGAACGAC GAGCAACCCC TCGCAAAACC CGACGTGCCC GTCAGTTCCA AGACCGAGAC
ACAGCCAATA CCAACAGGTG ATCGCATCCC ACAGCCCAGG AAAGACGTAG ATTCGGAACA
CATCGTAGAA GATAGGCCCC CGGAGAATGA TGGAAAAGTC CACTCGCGGA AGGCGCGCAT
TACGAGAATG AAAGAATCAA ACAAAGATGG CGTAGAAAAG GGAAATGAAC TCGCAAATCC
CAAGGCGCTC GAACCCTATG GTGGGCCAGC ATTGGTCGTC CGTAAAGCAG GGGACCGCAT
TCGGCACTTA GGCAATACCG ATCTTTTTGT AAATGAGACC AAATGCCCAG CCAACCTTAT
CCCAGACGAT GTTCAAACAA CCCTCGTAAT TCAGTCGAGC TCCAATCGCT TATGGATTTT
AGCGGAGACT TGTAAGCGAT GGAATGACCC GATCATAGCA GTGATCGCTT TGACAAGTAC
AGAGGACCAT GACGAGGTTT CGGCGCTGCT TTCTGGTTGG GACGATAAGT GTCCTCACCT
TCAAGTAATT GTGTACCAGA TGGATACAGA CGAGGAAAAG CCTGAGATGT ATCCTGTGAA
CCGCTTGCGC AATATTGGAT TGGATGCAGT GCATACAAGC CACGTACTAG TTGCGGATGT
CGATTTTATT CCGGCGCAAG ATTTGGCTCG GTTGATTCGC ACGACGCTGC TTGACCGTGC
TAGACTTCGA GTACTGAAAG ATGACATGAT CCCGAAAGAC CAAGATGCGA TTGTTGTTCC
CGCATTTGAA CGCCTACTGG CAGAACCGTG TACATCCGAG GATAGCTGCA AAGAACATCT
TCGAAGCAAT AGCTCATTCA TTCCGCATAC TTTTGACGAT CTTCGTTCTT GTATTGCCGA
AAAAAGCTGC ATCGTTTTCC AGAGTAAAGT CAATTGGGAA GGTCATTTTT CGACCCACTC
GGAAGACTGG CTGAAGAAGA AATGGTACCA GGGCGAACCG ATCGCTTTTG GCGAGGGCAA
ACCAAGCGTC CGTCACATTC GCACGCTCGA TTGCTTCGAC TCGCTACGCT ACGAACCATA
CGTCGTCCTG CAATGGTGTC CGACGGGCAA ACCTGATCCA GTACGGGCCA CTGCTCCTTA
CTACGATGAG CGCTTCCACG GCTACGGCAA GAACAAGATC CAGTATATTC AACACTTGCG
GTTAGCGGGT TATCACTTTG CTGTTTTACC CGAAGGTTTT ATTGTGCACA ACCCACACCG
CGACTCCAAA GCCAAGGAAA CTTGGAACAA CGTAAAGGAG TCTACGTTGC ATGCTGATAT
GGATCGGCTT TACCCGACAT TTTTGAAGGA GTTGTTTCAG AAGTATAGGT ATTCGAAGCA
TCGTGCTGTA GAGCTGTGTA AGCAATAAAT TGCGAGTTTT TGCGGGTTCG GAAATGACAC
GATGTTACTG CTGTAAGGGT AGCAAATCGT GTGGCAACGG TATTTCGCGA CATCGCTTCT
CAAACGCGTC GACTTGTCGC TCCGCAACTT GTCTCAGAAC CGTATCCAGT GCTCCGCGAA
TGACTGGATC ACTGACCGTC ATTTCGACTT GAAAGTCTAC TTTGCATTGT GTGTTTTCGA
AACCATCTAC CGGACTGAGC GTCCATTGAC TCCGCAGCGA ATCGAACATT TTGCTTTCGA
TACTTTGCGT TTCCACAGTC CAGCGCTCCG GAACCACGTG CACCCGAGAA ACGTACGTTT
CTTGAAAGAA TGGCGGCATC CCAACCGTCA AAGTAGCTTC AAAGGACCGT CCGTCGTTGT
CTTTCCGCAA AATCTTGGAA TATGAGCACA GTGGGAGGAA TTTGGAATAG GCGTCGACAT
CTTGAATGAT TCGAAACAAG TGAATGGGGT GTGTCTGGAG AATCTTCCGT TCCGTGTGAC
GTTTGGTAAC GGGGGACGAT AGGAAACTCC TCAGAATCAT GCACCGACCG TTTCTTGCTA
CAAAGTCCAA CAGCGGCAAC AATGGTTTGG GTGCCGGACT GATGCGTCTA GTCTAGGCAA
CGAGAAGGCA ACTTGCTACT TGTACGGCAA AGAGATACAC CCGAAGCACG CCAAGGACTC
GCGATTTCAT CCATCCGGTG CACTGGAATA GATTCGATTT TCCGAGACCT GCACTGTTTC
TACCCGCCAT GCAGGAATGT TCACATTATT CGGCTCGGCA GGAAAACTCA TCCAACGATC
AATCCGTACG AATAGCGGAC TCCTCGACTA TGACGTCATG AAAGGTTGGG ACGAGTTTCG
TACGATCTCC CGTGACACGT GA
 
Protein sequence
MLQNIVYLPL HSFFDKNPRY DWLACKKAHN NLTPNLIATM SISIEHEDNT FKQGEHVEEN 
IVDVYDDEEE VISNSGCGVL GRDDTKEKVI NWVGLIGDLF IRSLKCVVLP LVFINVIISV
VDMMTIGRAG SIGWKTIGLY LTTTVIASIL GILSILSFKP LFEEGTFTAS SPATIKLGCN
DSGEYKTELQ DGTLTCTADT GNSSQFFIED LSQSFVRASG SVRSDISLSD TIYEGVFTNR
LWRLISRPFA IAFSVALSKV FDRQRDHDTS FIIPFLKELD SVFLTIINWI IMCTPFAVLS
LIASAIGKQE DLADSFANVG YLVVATITAM ALQIAVVHCL IFGLVTRSNP WHYLKYMIPA
QTMAFACSSS AATIPMTLKC VQSTNRVPEP VARFVIPLGA TVNMDGGAIY FPCACIWLAV
LNGIDPDIAS YFLLVIISTI GSAGTAPVPS ASLVLIITAY NTVFNTTGVP EGFSYILAID
WFMDRLRTVV NVTGDTVVAG MVSHLCPDGL HETKTRHDSS VEDEPSTDEE VAKRLPSMPL
FGFRKQRKAS RSPSPTRGAA SSSTASRANT GTTRPLRSRR THVDSDERMH NPLGSPMLLP
TNYDPDGRLG QNAYQTSPSM NTCNNFLLGG NYYPGKDKKR RHYRTKAIWY RIFCSSGPRQ
IVTFIVSLYL FLWLPITHLL STSQAPSLTN FDWLLRDTTL QLPTMEEQRD TASKLNIERD
QLDAEGGISD RLRILEKIVP DWFHRNDEQP LAKPDVPVSS KTETQPIPTG DRIPQPRKDV
DSEHIVEDRP PENDGKVHSR KARITRMKES NKDGVEKGNE LANPKALEPY GGPALVVRKA
GDRIRHLGNT DLFVNETKCP ANLIPDDVQT TLVIQSSSNR LWILAETCKR WNDPIIAVIA
LTSTEDHDEV SALLSGWDDK CPHLQVIVYQ MDTDEEKPEM YPVNRLRNIG LDAVHTSHVL
VADVDFIPAQ DLARLIRTTL LDRARLRVLK DDMIPKDQDA IVVPAFERLL AEPCTSEDSC
KEHLRSNSSF IPHTFDDLRS CIAEKSCIVF QSKVNWEGHF STHSEDWLKK KWYQGEPIAF
GEGKPSVRHI RTLDCFDSLR YEPYVVLQWC PTGKPDPVRA TAPYYDERFH GYGKNKIQYI
QHLRLAGYHF AVLPEGFIVH NPHRDSKAKE TWNNQIVWQR YFATSLLKRV DLSLRNLSQN
RIQCSANDWI TDRHFDLKVY FALCVFETIY RTERPLTPQR IEHFAFDTLR FHSPALRNHV
HPRNRQQWFG CRTDASSLGN EKATCYLYGK EIHPKHAKDS RFHPSGMFTL FGSAGKLIQR
SIRTNSGLLD YDVMKGWDEF RTISRDT