Gene PHATR_36940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36940 
Symbol 
ID7204726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp704807 
End bp705694 
Gene Length888 bp 
Protein Length295 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185936 
Protein GI219121424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.945986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAAT CTCACGTGAC TTCCGAAGAG CAACCAGGCG AACCGCACCA ACGGTACGAC 
AATGAGAAGA TTTTGTTGCG GCACTTTCGA GATATCCGGA GCTCCGGAAA TGTAAACGGG
GCGTTGCAAT GGTTTTGTGC GCCAGACTCG TGGCAAGAAA ACGTGACGCC GGGAGTTGGG
CGGGAGGGGC AGGGTGGGAA ATGGTACGTC GATAAAGACT GCTCCAACCT TACCATTATG
GCACCGGCAA AGAAAGACTT TTGGCGAAAG ACGTACTACG AGCCGATTTT GGTGAAGGAC
GACGGACCTT TTCTGTACCA CGAGCTAGAC GCTTCGCAGC ATTATACGGT TGAGACGACT
TTTCACTTGA CCGCTGCTAG ACAATTTGAC CAAGCCGGCC TTTGTGTACG CATAACTCCA
GAACATTGGA TCAAGACGGG TATCGAAGTC GTTGACGGCG TCCCGCGCTT ATCCTGTGTC
GTCACCAATA TTTACAGCGA TTGGAGTACA CAACCGTGGT CGGCTTCGCC GCCCACAATG
GAGAGTTCAG TGTCTGCTGA GAAGTCGGAC GCAGTCTTTG TTAGGGCCCA AATTCGTATT
CACTGTCGTG GGTCGAGTTT TGTGGTGGAG GCGAAAGAGT CAAGCAAGGA ATGGGAATTT
TTACGCATTG GCCATTTAAA CCGGGATATG CGTCACACGA ACGATCCTTT GCGAAATCAC
TCCGCGGTCG AAAAGTCCTG GAACGGGCCG TCGGCTGCCG AAGGAAAATT GTGGGTTGGA
GTCTTTGCTT GTTGCCCCGT AGACCAGCAA GGAAGCTCGG TGACATTTTC CAACTTTTCG
ATTGCGGCTG GTTCGAAATT TGACCACAAC GCGGATGATA ACCACTAA
 
Protein sequence
MMQSHVTSEE QPGEPHQRYD NEKILLRHFR DIRSSGNVNG ALQWFCAPDS WQENVTPGVG 
REGQGGKWYV DKDCSNLTIM APAKKDFWRK TYYEPILVKD DGPFLYHELD ASQHYTVETT
FHLTAARQFD QAGLCVRITP EHWIKTGIEV VDGVPRLSCV VTNIYSDWST QPWSASPPTM
ESSVSAEKSD AVFVRAQIRI HCRGSSFVVE AKESSKEWEF LRIGHLNRDM RHTNDPLRNH
SAVEKSWNGP SAAEGKLWVG VFACCPVDQQ GSSVTFSNFS IAAGSKFDHN ADDNH