Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATR_36915 |
Symbol | |
ID | 7204716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011679 |
Strand | + |
Start bp | 648245 |
End bp | 649390 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185757 |
Protein GI | 219121051 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.893691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCATGA GATCGACTAC AGGCAACCCA AGTACTAGCT TTTCAACGCA GGCGCAGCAA ACTGCGATGC AGCAACTTGG TTTGTGGGGA CCGATCGGAG GTGTGCGGCC AAGCACCCGG ACTGTTCCAC GAAGCAGACG CCAGCGCCCG GGCCGTTCGC ACTATCTCAA CGAACCTCTC AATCTAGCAG ACAAGATATT TCCGGTGACC GCTATTCATG TGGCTCAAAC GATTGATATT CTTTCGCTTG CAAGTAACTT ATTTACCAAC GAAAACACGA GTCCTGCGAC GAAGCCGACA CTGAAGAAGG AGATGTTTGG GAAAAATTCT ATCGTCATAA GGTTGGCACC ATCGACTGAA GATCCGGACC GTCCTCGATT CATTGCTATC TTCCGGTTTG GATCGGTTGT GTTCCTGAAT GTGTCGCCTC GCGAGACGGC GGAGATCGTG GACGAAATTA AAGCCAAACA TTGTAAAGGG GCTGTCCTGC AAGGAATCCC ACGCAAGGAA CAATTCGGTG TCCTAGTAGA TCATAGCTTT GCGAGCCATG CCGATGCCAT GTATGCCAAG TATGCCAATT CCGATAAGAG TACCGAAGAC GGCTATGCCG TGGTGACTGG TGACTATTGT GTTGTACCAG AATTGGACAT GAACGGCTTT GCCGTCATCA GCAATATTAT GGCGCAAACA GTGGCTTTGG ATACGTACAA CGACTCGGTT GACGATTTGC TGTCTAACTT TACTTCCGTC AATTCTAGCG TGACGAAAAC CGGACATCTA ACGTCTGCTG ACAAGAACTT TTTGTTCAAA ACCGTTGCCC AGAATAATTC TATCTTTATT GATATGATTT CAAAAATCCG AATCAAGGAT CGATCCGACA CAGCGTGGAA TTTGACGAAG TATGAAAAGA TCCATTATGG ACTTAAGGAT GAGTTCGAAT TGGACGATCG CTTTGACATG ATTGAAACCA AACTGGCTTT TATTCAACAA AACTCCAAGT TCTTTTTGGA AGTTTTGCAA CATCAAAAGA CCAACAGTCT CGAGTGGATC ATCGTCCTAC TTATTACTTT AGAGTGCGGT CTCATGTGCG TGGAAATGTC CGGTATGGGT GAAGTCTTTT TCTCCAGACT TGGGTCCATG TTTTAG
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Protein sequence | MFMRSTTGNP STSFSTQAQQ TAMQQLGLWG PIGGVRPSTR TVPRSRRQRP GRSHYLNEPL NLADKIFPVT AIHVAQTIDI LSLASNLFTN ENTSPATKPT LKKEMFGKNS IVIRLAPSTE DPDRPRFIAI FRFGSVVFLN VSPRETAEIV DEIKAKHCKG AVLQGIPRKE QFGVLVDHSF ASHADAMYAK YANSDKSTED GYAVVTGDYC VVPELDMNGF AVISNIMAQT VALDTYNDSV DDLLSNFTSV NSSVTKTGHL TSADKNFLFK TVAQNNSIFI DMISKIRIKD RSDTAWNLTK YEKIHYGLKD EFELDDRFDM IETKLAFIQQ NSKFFLEVLQ HQKTNSLEWI IVLLITLECG LMCVEMSGMG EVFFSRLGSM F
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