Gene PHATR_36915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATR_36915 
Symbol 
ID7204716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011679 
Strand
Start bp648245 
End bp649390 
Gene Length1146 bp 
Protein Length381 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185757 
Protein GI219121051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.893691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCATGA GATCGACTAC AGGCAACCCA AGTACTAGCT TTTCAACGCA GGCGCAGCAA 
ACTGCGATGC AGCAACTTGG TTTGTGGGGA CCGATCGGAG GTGTGCGGCC AAGCACCCGG
ACTGTTCCAC GAAGCAGACG CCAGCGCCCG GGCCGTTCGC ACTATCTCAA CGAACCTCTC
AATCTAGCAG ACAAGATATT TCCGGTGACC GCTATTCATG TGGCTCAAAC GATTGATATT
CTTTCGCTTG CAAGTAACTT ATTTACCAAC GAAAACACGA GTCCTGCGAC GAAGCCGACA
CTGAAGAAGG AGATGTTTGG GAAAAATTCT ATCGTCATAA GGTTGGCACC ATCGACTGAA
GATCCGGACC GTCCTCGATT CATTGCTATC TTCCGGTTTG GATCGGTTGT GTTCCTGAAT
GTGTCGCCTC GCGAGACGGC GGAGATCGTG GACGAAATTA AAGCCAAACA TTGTAAAGGG
GCTGTCCTGC AAGGAATCCC ACGCAAGGAA CAATTCGGTG TCCTAGTAGA TCATAGCTTT
GCGAGCCATG CCGATGCCAT GTATGCCAAG TATGCCAATT CCGATAAGAG TACCGAAGAC
GGCTATGCCG TGGTGACTGG TGACTATTGT GTTGTACCAG AATTGGACAT GAACGGCTTT
GCCGTCATCA GCAATATTAT GGCGCAAACA GTGGCTTTGG ATACGTACAA CGACTCGGTT
GACGATTTGC TGTCTAACTT TACTTCCGTC AATTCTAGCG TGACGAAAAC CGGACATCTA
ACGTCTGCTG ACAAGAACTT TTTGTTCAAA ACCGTTGCCC AGAATAATTC TATCTTTATT
GATATGATTT CAAAAATCCG AATCAAGGAT CGATCCGACA CAGCGTGGAA TTTGACGAAG
TATGAAAAGA TCCATTATGG ACTTAAGGAT GAGTTCGAAT TGGACGATCG CTTTGACATG
ATTGAAACCA AACTGGCTTT TATTCAACAA AACTCCAAGT TCTTTTTGGA AGTTTTGCAA
CATCAAAAGA CCAACAGTCT CGAGTGGATC ATCGTCCTAC TTATTACTTT AGAGTGCGGT
CTCATGTGCG TGGAAATGTC CGGTATGGGT GAAGTCTTTT TCTCCAGACT TGGGTCCATG
TTTTAG
 
Protein sequence
MFMRSTTGNP STSFSTQAQQ TAMQQLGLWG PIGGVRPSTR TVPRSRRQRP GRSHYLNEPL 
NLADKIFPVT AIHVAQTIDI LSLASNLFTN ENTSPATKPT LKKEMFGKNS IVIRLAPSTE
DPDRPRFIAI FRFGSVVFLN VSPRETAEIV DEIKAKHCKG AVLQGIPRKE QFGVLVDHSF
ASHADAMYAK YANSDKSTED GYAVVTGDYC VVPELDMNGF AVISNIMAQT VALDTYNDSV
DDLLSNFTSV NSSVTKTGHL TSADKNFLFK TVAQNNSIFI DMISKIRIKD RSDTAWNLTK
YEKIHYGLKD EFELDDRFDM IETKLAFIQQ NSKFFLEVLQ HQKTNSLEWI IVLLITLECG
LMCVEMSGMG EVFFSRLGSM F