| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_36897 |
|---|
| Symbol | |
|---|
| ID | 7204708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | + |
|---|
| Start bp | 618578 |
|---|
| End bp | 619465 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185747 |
|---|
| Protein GI | 219121031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000649559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGT TTGCCAAGCG AAAACGAACT GTAGATGCGA AAGCGAAATC TCGTTGCGAG
ACATTCCAAT CTGACAAGCA AGTTGAGGAG CTGCTGATAC AGGATCCGAG TACTTGGAAC
GCCAAACAGC GGCGTATGAT CAACCGATAC CAAGACCGCA AAGCTACTGA AGCCACTGAG
ACTCTGACGG GCGCCACAGA TGGGGAAGCA TTGATAAAAG AGACAATTGA CAGGAACGAG
GCCAAACGAC AAAGCAAAGT GTCATCTGAT GATGGAATTA GGCTTCCTGA TGAAGGGAAT
GATGAAGCCG TATCCGAGTC GAAAGAACTC GGAGACCTTG ACATTGAGTC TACAGGTGAC
GATAATACCG GTGCAACGAA CATAAAAGAT GAGAACAACG GAGTTGATGA TGAGCTTCAA
CTTTTGTTGG ATAAGATCAA TTCTAAGCAA AGACGGAAGA TCTCGAGAAG TGTAGAAAGG
GGCGAGCTTT CTCCCGCAGA TGCCAAGAAA GAAGCACAGA CTGTTCTGGC CGAATCAATT
CCCAAGGAAG CTTCTCGTCC CTCGCAGGAT ATTGACCTAG ATAAACCAGA ACCTCATGCA
GACGGATCGC CTAAAAAGAA ACGCCGGCGT AAAGGGGGTG AAATAGATTT GAGTAAGCTA
TCCCCGGAAG AACGCCTACG TCGGGAAGAC CAGCGTCGTC GCCAACAAGA AGCTGCAGAT
CGTGCTGCCA GGGCACCTTC CGGACACAGC CACCCGTTGA ACTCCGAACG ACGGCGTGCC
AATCGCCGGA AACCGAAGTG GTCCAGAAAG CAAGCGGTAG CAGTAGGCAA CGAACACGAC
TCGTCAGGTT ACCATATGCG AAGAAATCAA GACGTAGTGG TGAAGTAG
|
|---|
| Protein sequence | MKLFAKRKRT VDAKAKSRCE TFQSDKQVEE LLIQDPSTWN AKQRRMINRY QDRKATEATE
TLTGATDGEA LIKETIDRNE AKRQSKVSSD DGIRLPDEGN DEAVSESKEL GDLDIESTGD
DNTGATNIKD ENNGVDDELQ LLLDKINSKQ RRKISRSVER GELSPADAKK EAQTVLAESI
PKEASRPSQD IDLDKPEPHA DGSPKKKRRR KGGEIDLSKL SPEERLRRED QRRRQQEAAD
RAARAPSGHS HPLNSERRRA NRRKPKWSRK QAVAVGNEHD SSGYHMRRNQ DVVVK
|
|---|
| |