| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_36711 |
|---|
| Symbol | |
|---|
| ID | 7204706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | + |
|---|
| Start bp | 196740 |
|---|
| End bp | 197312 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185650 |
|---|
| Protein GI | 219120837 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCC CCGCAGCTCA ATCCAAGGCT CAAGCCCTCA ACGCCCGAAT GGAGACGGAA
GCACGGGTAC TTCTGGATGA AATCGACAAG CAACACGTCC GCAAGGTCGC CCGATCGGCG
TATGCCTGTG CCGTTTCTTG CTACGACAAG GCCGGAGCAT CGGGAAGTCC CGATGCCCTC
GAAGTCTGTG TGCAGAATTG TCAAATCCCC CATCAGCAAG CACATGCCTA CGTCCAAAAT
GTAAGGATTT ATTTTTTGTT CGCTCCCATC CATAGTTTGT TCCCAACTGC CACTAAGCCC
AATCGACGAC GTCTTGCTAC TCTCGTAATT CATTCTTTCG TCACTTTTCG ATACTCACAG
GAAGTGGCGC AGTTTCAAAA TCGTTTGAAC CGATCGATGC AAGAATGCCA AGACAAGGCT
CGTGACATGA TGCAGCCTGG ATACGAAAAC GACGCCAAGA AAATGGCTAA AGTAGAAGAC
GCGCTTATAT CATGCATGGC CAAAACGGTG GACGAGCATA TTCGGATGTT GAAACCCATG
AAAGATCGTA TACTGACGCA ATTAAAGAAA TAA
|
|---|
| Protein sequence | MASPAAQSKA QALNARMETE ARVLLDEIDK QHVRKVARSA YACAVSCYDK AGASGSPDAL
EVCVQNCQIP HQQAHAYVQN VRIYFLFAPI HSLFPTATKP NRRRLATLVI HSFVTFRYSQ
EVAQFQNRLN RSMQECQDKA RDMMQPGYEN DAKKMAKVED ALISCMAKTV DEHIRMLKPM
KDRILTQLKK
|
|---|
| |