| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATR_36649 |
|---|
| Symbol | |
|---|
| ID | 7204476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011679 |
|---|
| Strand | + |
|---|
| Start bp | 16892 |
|---|
| End bp | 18405 |
|---|
| Gene Length | 1514 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185614 |
|---|
| Protein GI | 219120765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0337592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTCA GCGAGAAATC GAACATCCGA TCTTCGGATC GTCAAGATCT GCCGGGTCGA
AACTCCCGCA ATGGAAATAT GTTGGGAGAC GAGTTAGGGC TTGTCGGCGC CGGTACTTTG
GACGAGTCTA TCACTTCTTC GAACGTGGAA CGAGGAAGAA ACACTGATTC GACTGGAATT
GATACGTCAA TAAATGCTAC CCAAGTTGAC GACGGAAAAG GAGCTGTTAT GGCACCACAT
TTGGAACAAC AAGATACTGA TGAAAAGGAT GGAGCTGGGA AAAAGAAGTG GATGACATTT
GGTGCCGTCG GAGGCCTGGT CGCTACGGCA ACGGCCTTGA TGCTGCGAAG TGTTCGAAAA
ACTGATGACA ACGAAATTGC TGGTCCAAAC GTGTCTGGCG TCGACAATGG AGTGAGTGGA
GTGGATAATG CTGCAGATGC CACACAAGAG GCAATTAATC AGTCGTTGTC CAATGCACAG
TCAGTTGCTC GAGAAATGGC GCTTCAGGCT GCACAACAAG CTGCATCATC AGCTGCTGCG
GCAACAACAG CCGCAGCGGC AGCGGCAACC GCATCCGGTG GAATTTTTGG TGCTGCTATT
GGATCTATTG CAGGCGCCTC TACTGGAGTG CAAGTTGGAG TAGTCGTTGC CATTGCCGCA
GTGACTGCGG TCTCCGTTTC GACGGGTGTG GTGGTGTCAG AAAATAGAGC CGAGCAATCT
CAACCGATAC CAACCACGCG AGGAAACTGC AGTGATACGT TTGAAGTGAA AGATGGGCGT
CTTGCGGTGG AGTTTGCGGA TTTGTTTGTC GAATCAATCC CAGATGACAA TGTCCTTCTT
CTCGAAAGGA ATTTTGTCAA GCTCTACAAC GAAGCTTCCG ATACTTGCAA TGAGCTCTAC
GAACGAGAAA TGCTTGAAGC CAAGTTGGTT TCTTGGGAAG TAGAGGTAAA GAATTCGCTG
AACTTTACGA AGCTGTTGTG GGAGGCCCGT GTGACTTGCA CTGGCTGCTT TGACATGGAA
CCTTTGTTCT ATTACAACGA CTTGCCAGAA AGTGCTCGGA ACCTTGTTGA GGCTATCGAA
TACAAAAACT TTACAGAAAA AATTCCTGTC TCGCTTATAG AATTTTCAAG TCCCTTTGGA
GTAGCAACAG CAACAGTACT GGAAGCCGAC GGTCCAAAAC AAATGTATAT AAATACACTT
GATGCGTTGA CCGGAGAAGT GGTGGACGCA GTCACAGTCC GTGTGCTCCC TGATGGGTTG
CTAACACAGT CGCCAGATCC TCCCCCAAAT GCCTCCACGG ATGACAGAAT TAGCGAGGAG
CCCTCTCCCA TCAACTTTGC TTCATCAACA CCAAATTCAA GCCCATCATT TGTGCCTATT
TCCACTTCAA GCGTTCCACA ATCATCAGTA CCATTCAGTG AACCGTCATC ATTTCCAGTG
TTCCTGACAG CAAGCCCAAC CACTGTGCCC CTTGCTTCAT CAAGTGTTCC ACCATCTTTT
GTCCCATTGA GTGA
|
|---|
| Protein sequence | MGVSEKSNIR SSDRQDLPGR NSRNGNMLGD ELGLVGAGTL DESITSSNVE RGRNTDSTGI
DTSINATQVD DGKGAVMAPH LEQQDTDEKD GAGKKKWMTF GAVGGLVATA TALMLRSVRK
TDDNEIAGPN VSGVDNGVSG VDNAADATQE AINQSLSNAQ SVAREMALQA AQQAASSAAA
ATTAAAAAAT ASGGIFGAAI GSIAGASTGV QVGVVVAIAA VTAVSVSTGV VVSENRAEQS
QPIPTTRGNC SDTFEVKDGR LAVEFADLFV ESIPDDNVLL LERNFVKLYN EASDTCNELY
EREMLEAKLV SWEVEVKNSL NFTKLLWEAR VTCTGCFDME PLFYYNDLPE SARNLVEAIE
YKNFTEKIPV SLIEFSSPFG VATATVLEAD GPKQMYINTL DALTGEVVDA VTVRVLPDGL
LTHVPDSKPN HCAPCFIKCS TIFCPIE
|
|---|
| |